Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0860 ATGGAGAATTCCTACATTCCTTATCTGGGAATAAATGACGATGATGAACAACCTGTCTGCCATCATCAATCAGGTACTTCGCAGAACCGTGATGACTTGATATTCTCTCATACCAGATCCTATAATCTGCTTCTGTCTTTTGATAACTCTGATGTAGAGAGAGTACCAAATTGCACTATACAACAACCTTGTAGGAAACAAGAATATGGTCATGATGATTCTGCGAAGCAATTTGGGAGTAGAAGGAACCCTAAATCATTAGATCATGTTATGGCTGAGAGAAAACGAAGACATGAATTGGCTGAGAAATTCATTGCTCTTTCGGCTGTTGTGCCTGGCTTGAAAAAGATGAACAAGGCATCAGTACTTGGTGGAGCCATCAATTACTTGAAGCAGCTTCAACAACAAATCAAAGAGCTAGAGGAGAAAGGCAACAATAAGAAGAAAAGCAAAGAGAAACCATATACTTGTGGACACAACAACTGCCACAATAATGATGATGGTAATGATGACGATATGTTTCCTGAGGTGGAAGCAAGAGTTTTAGAGAGAGAAATACTCATAAGAATTCAGTGTAAGAAACAAAATGAAATTATGCTCAAAATTGCGTCTCTCCTTGAAAACTCTCATTTCACTATAACCCATAGCAGCGTATTGCCATTAAGAAACTCCTGCACTCTCAGCATCACCATTATCACCCAGATGCGTGATGAATACGGCATGACCGTGAATGATCTGGTGAAGAGCTTGAAACGAGAGATCTCTTCAAATTACGTGAGAGTGCATGCTAGCTAG 795 0.3975 MENSYIPYLGINDDDEQPVCHHQSGTSQNRDDLIFSHTRSYNLLLSFDNSDVERVPNCTIQQPCRKQEYGHDDSAKQFGSRRNPKSLDHVMAERKRRHELAEKFIALSAVVPGLKKMNKASVLGGAINYLKQLQQQIKELEEKGNNKKKSKEKPYTCGHNNCHNNDDGNDDDMFPEVEARVLEREILIRIQCKKQNEIMLKIASLLENSHFTITHSSVLPLRNSCTLSITIITQMRDEYGMTVNDLVKSLKREISSNYVRVHAS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0860 264 MobiDBLite consensus disorder prediction 141 171 - -
Mibi04g0860 264 MobiDBLite consensus disorder prediction 66 87 - -
Mibi04g0860 264 Pfam Helix-loop-helix DNA-binding domain 89 134 IPR011598 GO:0046983
Mibi04g0860 264 Coils Coil 123 153 - -
Mibi04g0860 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 133 IPR011598 GO:0046983
Mibi04g0860 264 SMART finulus 90 139 IPR011598 GO:0046983
Mibi04g0860 264 PANTHER BHLH TRANSCRIPTION FACTOR 42 254 - -
Mibi04g0860 264 MobiDBLite consensus disorder prediction 141 156 - -
Mibi04g0860 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 145 IPR036638 GO:0046983
Mibi04g0860 264 Gene3D - 76 150 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0860 Mibi-ChrMibi04 17513430 17517753 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0860 80 259 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.021 7.91e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0860 HLH 1.4e-09 No_clan