Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0843 ATGACACGTCACCAACGATTACTTTCTCCCTCAACGTCGATTCTGGTTTTCCGTTTCACTATAAATCACCATTTCCCTCGCAGCATTTCGAGCTCTCATATCCTCCGTTCTTGTTCGTTTTGCCGGTTTGCATTTTCTCCGTTTAAGGGTTTGCCGGCAAAGATGGGTGGTGCTTTATTGTCGGAGCTTGCGACGGAGATTGTGATCCCGGTGTGTGCTTTAATAGGGATCGTTTTCTCTTTGGTTCAATGGTTCCTCGTTTCTCGTGTTAAGCTCACTCCTGAACGCTCTTCTTCTCCCAGTAACAAGAATGGGTATGGTGATTACCTTATTGAGGAAGAGGAGGGTATTAATGACCACAATGTTGTTGTTAAATGTGCTGATATTCAGAGTGCTATTTCTGAAGGTGCTACATCCTTTCTTTTTACCGAATATCAATATGTGGGAGTCTTCATGGCTGCTTTTGCAATTCTAATCTTCCTTTTCCTGGGTTCTGTGGAGGGCTTCAGCACCAAGAGCCAGCCCTGCACATATGCTAAGGACAAGATGTGCAAGCCAGCTCTTGCAACTGCAATCTTCAGCACCGTGTCTTTCTTGCTAGGTGGTCTCACTTCAGTCCTTTCTGGTTACCTTGGGATGAAAATAGCCACCTATGCCAATGCTAGGACAACATTGGAAGCAAGGAAGGGAGTTGGTAAGGCTTTTATTACTGCATTTAGGTCCGGTGCAGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTGCTCTACATAGCCATCAATCTTTTCAAGCTATACTATGGTGATGATTGGGAAGGCCTTTTTGAGGCTATCACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTTGGTGGAGGTATCTACACCAAGGCTGCTGATGTTGGTGCTGATCTAGTTGGAAAAGTTGAGCGAAATATTCCTGAGGATGACCCAAGAAACCCTGCTGTGATTGCTGACAATGTTGGTGACAATGTTGGAGATATTGCCGGAATGGGTTCTGATCTGTTTGGCTCATACGCTGAATCATCCTGTGCGGCTCTGGTTGTTGCTTCCATATCTTCATTTGGAGTCAACCATGATTTTACGGCTATGCTATATCCCTTGCTCATTAGCTCCATGGGTATTCTCGTCTGTTTGCTCACTACTCTCTTTGCTACCGACTTCTTTGAGATCAAGGCTGTTAAGGAAATTGAACCAGCATTGAAGAGGCAACTTATCATCTCCACAGTGTTTATGACCATTGGGATTGCAATTGTTTCTTGGATTGCTCTTCCATCATCCTTCACAATTTTCAACTTTGGAACTCAAAAAGTTGTCAAGAGCTGGCAGCTGTTCTTATGTGTGGGGGTTGGTCTCTGGGCTGGACTTATTATTGGATTTGTGACTGAGTATTACACTAGCAATGCTTACAGCCCTGTTCAAGATGTAGCTGATTCTTGCCGCACTGGTGCTGCAACTAATGTTATCTTTGGTCTTGCCCTGGGATACAAGTCTGTTATCATTCCCATTTTCGCCATTGCAATCAGTATTTTTGTCAGCTTTAGTTTTGCTGCAATGTATGGCATTGCTGTGGCTGCCCTTGGAATGCTTAGCACCATTGCTACTGGGTTGGCTATTGATGCTTATGGGCCCATCAGTGACAATGCTGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGCATCCGTGAGAGAACTGATGCACTTGATGCTGCTGGGAACACAACTGCTGCCATTGGAAAGGGATTTGCCATCGGATCTGCTGCACTAGTGTCTTTGGCACTCTTTGGTGCCTTTGTGAGCCGAGCTGCAATCTCAACTGTGGATGTTTTGACCCCTAAGGTCTTCATTGGACTCCTAGTTGGTGCTATGCTTCCCTACTGGTTCTCTGCCATGACCATGAAGAGTGTAGGAAGTGCTGCCTTGAAGATGGTAGAGGAGGTTCGCAGGCAATTCAACACCATTCCTGGCATCATGGAGGGACATGCCAAGCCTGACTATGCTACCTGTGTCAAAATCTCAACCGACGCATCCATCAAAGAGATGATTCCTCCTGGTGCCCTTGTCATGCTCACCCCACTCATCGTCGGTACATTTTTCGGTGTTGAAACTCTCTCAGGCGTTCTTGCTGGCTCTCTAGTATCTGGTGTGCAGATCGCTATTTCAGCGTCCAACACCGGTGGTGCTTGGGATAACGCTAAGAAGTACATTGAGGCTGGTGCATCTGAGCATGCTAGGTCCTTGGGGCCAAAGGGATCTGACCCACACAAAGCAGCTGTGATTGGCGACACCATTGGAGACCCTCTCAAGGACACTTCCGGCCCGTCCCTCAACATCCTGATTAAGCTCATGGCTGTGGAGTCACTTGTGTTTGCCCCATTTTTCGCCACTCATGGTGGTTTACTTTTTAAGATCTTTTAA 2457 0.4656 MTRHQRLLSPSTSILVFRFTINHHFPRSISSSHILRSCSFCRFAFSPFKGLPAKMGGALLSELATEIVIPVCALIGIVFSLVQWFLVSRVKLTPERSSSPSNKNGYGDYLIEEEEGINDHNVVVKCADIQSAISEGATSFLFTEYQYVGVFMAAFAILIFLFLGSVEGFSTKSQPCTYAKDKMCKPALATAIFSTVSFLLGGLTSVLSGYLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHDFTAMLYPLLISSMGILVCLLTTLFATDFFEIKAVKEIEPALKRQLIISTVFMTIGIAIVSWIALPSSFTIFNFGTQKVVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGIMEGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARSLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0843 818 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 63 808 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Mibi04g0843 818 PIRSF H+-PPtase 61 816 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Mibi04g0843 818 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 60 808 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Mibi04g0843 818 Pfam Inorganic H+ pyrophosphatase 104 803 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Mibi04g0843 818 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 64 813 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0843 Mibi-ChrMibi04 17224553 17229927 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0843 58 681 Primary Pumps ATPases AT1G15690 88.235 0.0 1122