Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0827 ATGGCAATTGCATCTTTCACTTTGTCTTCTCTGCTTCAACCCTCAACTTCTTCTTGTCTTTCTTCTTCTTCTTCTTCTTACTTCACTGGTGGGGTCCACCTCCGTTCGCATGAAAGCTTCATCTCTGTCAATTCGTTTTGTTCTACGTCGAATTCGGAGGTCCCTTCTCGGCGCCAGCTGCGAATTGTGGCTGTTGCTTCTGGTGACTATTATGCTGCTCTTGGAGTCCCCAAATCTGCCTCAGGCAAGGAAATTAAAGCGGCTTATCGAAGGTTAGCTCGCCAGTACCACCCTGATGTGAACAAGGAGCCTGGAGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCATATGAGGTACTATCAGATGATAAAAAGAGGGCTTTGTATGATCAATATGGAGAGGCTGGAGTTAATGGCACAATGGGAGGAGCATCTAGTGCTTATGCGACTAATCCATTTGATTTATTTGAGACATTTTTTGGGCCAAATATGGGTGGCTTCCCTGGAATGGATCCATCTGGATTTGGAGCACGTCGTCGCAATACTGTTACTAAGGGAGAGGATATCCGTTATGACATGACCTTGGAATTTTCTGAGGTGATTTTTGGAGCAGAGAAAGAATTTGATCTTTCTCATTTGGAAACCTGTGAAGTTTGTATTGGTACCGGAGCAAAGGTAGGCTCCAAGATGAGAGCGTGTGCAACTTGTGGTGGTAGAGGTCAGGTGATGAGGACTGAACAGACACCTTTTGGAATGTTCTCTCAGGTTTCAGTATGTCCAAACTGCGGAGGGGATGGTGAAGCCATATCTGAATATTGTTATAAATGCAGCGGGAAAGGACGTCTACGAGTTAAGAAGAAAATTAAAGTTAAAGTTCCACCTGGGGTTACCTCTGGCAGTATATTGAGAGTTGCTGGGGAAGGTGATGCTGGGCCAAGAGGGGGTCCTCCAGGGGATCTTTACGTATATCTTGATGTGAAAGAAATGCCAGGAATTGAAAGAGATGATATAAATCTCCGTTCAACGCTGACAATCAGTTACCTAGATGCCATACTTGGAGCTGTTGCCCAGGTAAAGACAGTGGAAGGCATTTCGGAGCTACAAATACCTCCTGGTACCCAACCTGGAGATGTCCTTGTCATTGCAAGAAAAGGCATTCCAAAATTAAACAAACCATCAATCCGTGGTGATCATTTGTTTACCGTTAAAGTTACTTTACCAAAACGTATCAGTACAAAGGAACGAGAGCTGCTTGAAGAACTTGCTTTGCTAGGCAACAACACTACAAGCAACCGATCAAAATCCCGTCCAAGAACTCAATCTTCTGGAAGTACAGAAGGTCCATCATCCCAAAATGCTGAAAGTCCGGCAACAACAGTTGTAGAAAAAGATGAAGAATCAGAAGACCAAAATGACTTATGGAAAAAGTTAAAGGATCTTGCTAGACCCCTAGCAAATGGAGCATTAAAGTGGCTAAAAGACAATCTCTAG 1491 0.438 MAIASFTLSSLLQPSTSSCLSSSSSSYFTGGVHLRSHESFISVNSFCSTSNSEVPSRRQLRIVAVASGDYYAALGVPKSASGKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAGVNGTMGGASSAYATNPFDLFETFFGPNMGGFPGMDPSGFGARRRNTVTKGEDIRYDMTLEFSEVIFGAEKEFDLSHLETCEVCIGTGAKVGSKMRACATCGGRGQVMRTEQTPFGMFSQVSVCPNCGGDGEAISEYCYKCSGKGRLRVKKKIKVKVPPGVTSGSILRVAGEGDAGPRGGPPGDLYVYLDVKEMPGIERDDINLRSTLTISYLDAILGAVAQVKTVEGISELQIPPGTQPGDVLVIARKGIPKLNKPSIRGDHLFTVKVTLPKRISTKERELLEELALLGNNTTSNRSKSRPRTQSSGSTEGPSSQNAESPATTVVEKDEESEDQNDLWKKLKDLARPLANGALKWLKDNL 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0827 496 CDD DnaJ_C 187 410 - -
Mibi04g0827 496 PRINTS DnaJ domain signature 71 89 IPR001623 -
Mibi04g0827 496 PRINTS DnaJ domain signature 89 104 IPR001623 -
Mibi04g0827 496 PRINTS DnaJ domain signature 105 125 IPR001623 -
Mibi04g0827 496 PRINTS DnaJ domain signature 125 144 IPR001623 -
Mibi04g0827 496 TIGRFAM DnaJ_bact: chaperone protein DnaJ 69 422 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi04g0827 496 MobiDBLite consensus disorder prediction 423 474 - -
Mibi04g0827 496 FunFam Chaperone protein dnaJ A6 chloroplastic 66 172 - -
Mibi04g0827 496 Pfam DnaJ central domain 216 280 IPR001305 GO:0031072|GO:0051082
Mibi04g0827 496 MobiDBLite consensus disorder prediction 459 474 - -
Mibi04g0827 496 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 25 433 - -
Mibi04g0827 496 CDD DnaJ 69 122 IPR001623 -
Mibi04g0827 496 Pfam DnaJ domain 69 130 IPR001623 -
Mibi04g0827 496 ProSiteProfiles dnaJ domain profile. 69 133 IPR001623 -
Mibi04g0827 496 Gene3D - 332 423 - -
Mibi04g0827 496 SMART dnaj_3 68 125 IPR001623 -
Mibi04g0827 496 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Mibi04g0827 496 Pfam DnaJ C terminal domain 189 407 IPR002939 -
Mibi04g0827 496 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 203 283 IPR036410 -
Mibi04g0827 496 FunFam Putative Mitochondrial DnaJ chaperone 276 322 - -
Mibi04g0827 496 Gene3D DnaJ domain 66 169 IPR036869 -
Mibi04g0827 496 FunFam Chaperone protein dnaJ 1, mitochondrial 327 435 - -
Mibi04g0827 496 SUPERFAMILY HSP40/DnaJ peptide-binding domain 333 418 IPR008971 GO:0006457|GO:0051082
Mibi04g0827 496 FunFam Chaperone protein dnaJ A6 chloroplastic 216 280 - -
Mibi04g0827 496 ProSiteProfiles Zinc finger CR-type profile. 203 285 IPR001305 GO:0031072|GO:0051082
Mibi04g0827 496 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 336 IPR008971 GO:0006457|GO:0051082
Mibi04g0827 496 SUPERFAMILY Chaperone J-domain 66 173 IPR036869 -
Mibi04g0827 496 Gene3D - 216 280 - -
Mibi04g0827 496 Hamap Chaperone protein DnaJ [dnaJ]. 66 480 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Mibi04g0827 496 MobiDBLite consensus disorder prediction 423 458 - -
Mibi04g0827 496 Gene3D - 186 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0827 Mibi-ChrMibi04 16919871 16928459 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0827 70 132 C2H2 Transcription Factor Family AT1G74250 49.275 1.02e-10 62.4