Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0821 ATGTCTTTTTGCCCAATATTTTTCTGTGCAAAGGGTTCAGATCGAAAAGCACGAAGTAAGAAAGTGTCTACATGGAGAGTCTTCTCTTTGAAGGAACTACACTCAGCGACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGGGGATTTGGCAGTGTATACTGGGGTCATCTTTGGGATGGATCACAAATTGCAGTGAAAAGATTAAAAGTTTGGAGCAACAAAGCTGATATGGAATTTGCTGCTGAAGTCGAGATATTGGCCAGAGTAAGGCACAAGAATCTTCTTAGCCTTCGTGGCTATTGTGCTGAAGGGCAGGAAAGACTAATTGTATATGATTATATGCCAAATTTGAGCCTACACTCTCATCTTCATAGACAGCACTCTGCAGATTGTCTTCTTCATTGGAGCAGGCGCATGAATATCGCAATTGGGTCAGCTGAGGGAATCGCATATCTTCACCACCAAGCAACACCCCACATAATCCACAGGGATATCAAATCAAGCAACGTGTTATTGGATGTGGATTTCCAGGCTCAGGTTGCTGATTTTGGTTTTGCCAAGTTGATTCCCGATGGGGCAACCCATGTAACTACGAGAGTTAAGGGAACTCTAGGCTATCTTGCGCCGGAATATGCCATGCTTGGCAAGGCATCGGAGAGTTGTGATGTCTATAGTTTCGGGATCCTCCTGCTAGAACTCGCGAGTGGCAAGAGACCAATTGAGAAACTAAGTGCTTCGATGAGGCGATCAATAGCTGATTGGGCCTTACCTTTGGTTATTGCGAAGAGATTTAGCGAACTTGCAGATCCAAAGCTAAAGGGTAAGTATGTGGAGGAAGAACTCAAAAGAATGATTCTTGTTGCACTTGTATGTGCTCAAAGTCAGCCTGAGAAGAGACCAGCCATGCTTGAGGTGATAGAGCTGCTTAAGGGAGAATCTAAGGATAAGTTATCTGAGTTAGAAAAGAATGAAGTTTTCAGAAACCCTATAGCTTTAGAAAACAGCGATGATGGGGCGTCAGCTGCTGAAGTTAGTTCAGATTTCATCTCAGAAGAGAAGGAATCAACATCTGAGATGAAAGAGAGCACGTAG 1098 0.4317 MSFCPIFFCAKGSDRKARSKKVSTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGHLWDGSQIAVKRLKVWSNKADMEFAAEVEILARVRHKNLLSLRGYCAEGQERLIVYDYMPNLSLHSHLHRQHSADCLLHWSRRMNIAIGSAEGIAYLHHQATPHIIHRDIKSSNVLLDVDFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKRPIEKLSASMRRSIADWALPLVIAKRFSELADPKLKGKYVEEELKRMILVALVCAQSQPEKRPAMLEVIELLKGESKDKLSELEKNEVFRNPIALENSDDGASAAEVSSDFISEEKESTSEMKEST 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0821 365 ProSiteProfiles Protein kinase domain profile. 40 328 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0821 365 FunFam PTI1-like tyrosine-protein kinase At3g15890 116 327 - -
Mibi04g0821 365 Gene3D Phosphorylase Kinase; domain 1 10 115 - -
Mibi04g0821 365 MobiDBLite consensus disorder prediction 349 365 - -
Mibi04g0821 365 SUPERFAMILY Protein kinase-like (PK-like) 21 311 IPR011009 -
Mibi04g0821 365 Coils Coil 305 325 - -
Mibi04g0821 365 SMART serkin_6 40 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0821 365 FunFam PTI1-like tyrosine-protein kinase At3g15890 12 115 - -
Mibi04g0821 365 ProSitePatterns Protein kinases ATP-binding region signature. 46 68 IPR017441 GO:0005524
Mibi04g0821 365 Gene3D Transferase(Phosphotransferase) domain 1 116 330 - -
Mibi04g0821 365 MobiDBLite consensus disorder prediction 338 365 - -
Mibi04g0821 365 PIRSF ILK 9 327 - -
Mibi04g0821 365 Pfam Protein kinase domain 41 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0821 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Mibi04g0821 365 PANTHER OS01G0253100 PROTEIN 21 317 IPR045271 -
Mibi04g0821 365 CDD STKc_IRAK 46 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0821 Mibi-ChrMibi04 16873818 16876310 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0821 28 314 Trihelix Transcription Factor Family AT1G70460 51.203 2.91e-96 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mibi04g0821 Pkinase 2.4e-44 CL0016