Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0820 ATGTTTTTCTGTGCAAAGGGTCTTGATCGAAAAACAAGAGGGAAGAAAGCACCTGCATGGAGGGTCTTTTCTTTGAAAGAATTAGTCTCAGCGACAAATAATTTTAATTATGATAACAAGATCGATGAAACAGAATTTGGCAGTGTCTACTGGGGTCAGCTTTGGAATGGATCACAAATTGCAGTAAAGAGATTTAAATTTTGGATCGACAAGACAGACACAGAATTTGCTGTTGAAGTCGAAATATTGGCAAGAGTATGGCACAAGAATCTTGTTAGCCTTCGTGGGTATTGTGCTGAGGGGCAAGAAAGGCTAATTGTATATGACTATATGCCAAATTTGAGCCTCTTCTCTCATCTTCATGCACAACATCCTAATGAATGCCTTCTTGATTGGAACAAACGGATGAATATTGCAATTGGGCTATCCGAGGGCATCTCATATCTTCACAACCAAGCAACACCTCAAATAATCCATAGAGATGTCCAAGCAAGTAAAGTTCTACTGGACTTAGATTTTCAAGCTCGAATTTCAGGTTTTGAATTTGCTAAGTTGATTTCTGATGGGGTAACCCATGTGAACGCCACAATTAAAGGAACAATCGGCTATCTCGCACCAGAATACGCCATTTTTGGTAAATTATCAACGAGTTGTGATGTTTACAGTTTTGGAATTCTTTTATTAGAACTTGTTAGTGGCAAGAGACCAATTGAAAAATTGAATGCCACAACCAAACTATCAGTTTCTGATTGGGCACTTCCCTTAGCTCGTGAGAAGAAATTTGGTGAACTTGCAGATCCAAAGCTAAAGGGAAACTTTGTGGAAAAAGAACTTAAAAGGGTGATTTTTGTTGGACTTGTATGTGCTCAAAGTCAACCTGAGAAGAGACCCACCATGCTTGAGGTGGTAGAATTGCTTAAAGGAAATTCCAAGGATAAGTTATCTCAATTAGAAAAGGATGAATTGTTCAGAAACCCTCCAACTTCGGAAAACAGAGATGGAGCATCATTTGGGGACAACAATTCCGACTTTGTCTCAGAAGAGAAACAGAATTAG 1056 0.3883 MFFCAKGLDRKTRGKKAPAWRVFSLKELVSATNNFNYDNKIDETEFGSVYWGQLWNGSQIAVKRFKFWIDKTDTEFAVEVEILARVWHKNLVSLRGYCAEGQERLIVYDYMPNLSLFSHLHAQHPNECLLDWNKRMNIAIGLSEGISYLHNQATPQIIHRDVQASKVLLDLDFQARISGFEFAKLISDGVTHVNATIKGTIGYLAPEYAIFGKLSTSCDVYSFGILLLELVSGKRPIEKLNATTKLSVSDWALPLAREKKFGELADPKLKGNFVEKELKRVIFVGLVCAQSQPEKRPTMLEVVELLKGNSKDKLSQLEKDELFRNPPTSENRDGASFGDNNSDFVSEEKQN 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0820 351 PIRSF ILK 5 321 - -
Mibi04g0820 351 CDD STKc_IRAK 41 308 - -
Mibi04g0820 351 MobiDBLite consensus disorder prediction 329 345 - -
Mibi04g0820 351 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 333 - -
Mibi04g0820 351 FunFam PTI1-like tyrosine-protein kinase At3g15890 7 110 - -
Mibi04g0820 351 SUPERFAMILY Protein kinase-like (PK-like) 18 306 IPR011009 -
Mibi04g0820 351 Pfam Protein tyrosine and serine/threonine kinase 37 306 IPR001245 GO:0004672|GO:0006468
Mibi04g0820 351 ProSiteProfiles Protein kinase domain profile. 35 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0820 351 MobiDBLite consensus disorder prediction 316 351 - -
Mibi04g0820 351 Gene3D Transferase(Phosphotransferase) domain 1 111 324 - -
Mibi04g0820 351 FunFam PTI1-like tyrosine-protein kinase At3g15890 111 322 - -
Mibi04g0820 351 Gene3D Phosphorylase Kinase; domain 1 7 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0820 Mibi-ChrMibi04 16850792 16854738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0820 22 302 Trihelix Transcription Factor Family AT1G68690 43.860 6.43e-80 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Mibi04g0820 PK_Tyr_Ser-Thr 1.4e-36 CL0016