Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0810 ATGATCTTCTACAGAAGTGGAACCTTGTTTATCTATGTGTTTTTTCTGCTAAGACTGTGTTTGGGTGATCATCAACAGCACATAAGCCAGATTTATCCCGGATTTGAAGCTTCTCAGCTGGATTGGAATAATGACCATGGTGGATTGTTCTTACTATCCAACAACTCAGTTTTTGCTTTTGGATTCTTCGGTACCCTTGATGTTTCCTTGTTTGTTTTAGTTGTCATTCACTTGAAAAGCTTTAAAGTGGTTTGGACTGCAAATAGGGGCTTACTGGTAAGAAACTCAGATAAATTTGTGTTTGACAAAACTGGTAATGCTTATTTAGAAAGAGGGGGTGGTTTGGTTTGGGAAACAAACACAGGAGGAAGTAAAGTTAGAGCCATGGAACTGAAAGATTCAGGAAATTTGGTGTTGATTAGTGAAGGGAGAGTTATTTGGGAGAGTTTTAGTCATCCTACTGATACCCTTTTGCCTAATCAACTTTTTGTTGAAGGAATGAGTCTAAAAAACTTCCCTAACAGAAATAACTTGTTTAGTTTTCTTACTTTTATGTCTGGAGATTTAGTGTTGTATGCTGGATATGAACCTCCTCAGATTTATTGGTCATTATCAAGAGAAATTAATAATGTAAGCAAGGGGGTTCATTTTCATTCTGCTTCTTTGGTTTCAAATTCTTGGAATTTCTATGACAAAAGTGGAGCTTTAAAATGGAAATCTGTTTTCTCTGATAAATCTGATCCTAAGGCAATGTGGGCTGCTATATTAGATCCTAATGGTGCTATCTCTTTTTATGATCTTAACAAGGGAAAATCTGTTACCCCTGAAGCAACTAGAATACCAGAAGATCCTTGTGGTATTGCCGAGCCTTGTGATCCTTATTATGTTTGCTTCTCTGACAATTGGTGTGAGTGTCCTTCACTTCTCAAATCTCGTTTCAATTGCAAGCCGCCTTTGACAAACACGGCCACCTCATCATGTTCTAGAACCCAAGAAGAAGACCTTCTGTATGTTGGCGAGAAACTCGATTACTTTGCCCTCAAGTATGTTCAGCCGGTTTCTAAATCATCATCCCTGAGTGCTTGTAAAGAAGACTGCTTAAGAAACTGCTCTTGCCTTGTGCTTTTCTTTGAAAACAGTACAGGAACGTGCTACCATTTTGACCAGACTGGTAGTTTCCAACGCTATAAGGCAAATTCCGGAGGCTATGTTTCATTCATGAAGATCTCTATTGAAGATGGAGATGGAAGAAAAGGAAGGAACCTAACTGTACTTGTCATTGTTATAGTTATTTTCACAATTCTGATTATTATTGGACTTGTGTTGGGGTTTTGGTATTGCTACAAAAACAAGCATCTCTTAGAGGATTCTCCAGAACTTTTGGAGGAAGATGATTTCTTGGACAGTCTTCATGGTATGCCAACTCGTTTTAGTTATAGTACTCTAAGTAAAGCCACTAAGAATTTCTCTACAAAAATTGGTGAAGGAGGGTTCGGCTCAGTTTATCTAGGCGTGCTTGAAGATGGATCTCAATTGGCTGTTAAGAAACTGGAAGGATTAGGACAAGGGGCAAAAGAGTTCAAAGCTGAAGTTTCCAGCATTGGAAGTATTCACCATGTTCATTTGGTGAAGCTTAAAGGCTTCTGTGCTGAAGGCCCTCATCGCCTTCTTGTGTATGAGTACATGGTAAGAGGATCTCTGAACAAATGGATCTTTAGAACCCATGAAAATGCTTTCTTGCTGAATTGGAATACAAGATTCAACATTGCATTAGGTACAGCAAGAGGATTGGCTTATCTTCATGAGGAGTGTGAGGTGAAGATCATACACTGTGATATCAAACCAGAAAATGTACTTCTTGACGAAAACTTCATGGCAAAAGTTTCAGATTTCGGTTTGTCTAAGCTCATGAGCCGCGAACAAAGCCATGTCTTCACTACATTAAGAGGAACAAGGGGGTATCTAGCACCAGAATGGATCACAAACTATGCAATTTCAGAGAAGAGTGATGTGTACAGCTATGGGATGGTCCTGCTTGAGATTATTGGAGGGAGGAGGAACTATGATCAATGGGAAGGATCTGAAAAAGCGCATTTTCCTTCCTATGCTTTCCGGATGATGGAAGAAGGGAAACTGAAGCAAGTTCTTGACCCAATGATAGACATTGAAGAGAATGATGAGAGAGCTTTTGCTGCAGCTAAGGTTGCTCTTTGGTGTATACAAGATGACATGAGTTTAAGGCCTCCAATGACCAAAGTTGTTCAAATGCTTGAAGGTGTTATTCCTGTACCTGAGCCACCATCATTATCCAGTTCAAGTTCTTATTCATCATTCCTTAAAATGGGTAGTGAACAAGCTTCTTCTTCCACACAGGCTTCCTTTTACAGTAATGTACCCCTATCTTGTGTTCAGTTATCAGGACCTAGATGA 2430 0.3938 MIFYRSGTLFIYVFFLLRLCLGDHQQHISQIYPGFEASQLDWNNDHGGLFLLSNNSVFAFGFFGTLDVSLFVLVVIHLKSFKVVWTANRGLLVRNSDKFVFDKTGNAYLERGGGLVWETNTGGSKVRAMELKDSGNLVLISEGRVIWESFSHPTDTLLPNQLFVEGMSLKNFPNRNNLFSFLTFMSGDLVLYAGYEPPQIYWSLSREINNVSKGVHFHSASLVSNSWNFYDKSGALKWKSVFSDKSDPKAMWAAILDPNGAISFYDLNKGKSVTPEATRIPEDPCGIAEPCDPYYVCFSDNWCECPSLLKSRFNCKPPLTNTATSSCSRTQEEDLLYVGEKLDYFALKYVQPVSKSSSLSACKEDCLRNCSCLVLFFENSTGTCYHFDQTGSFQRYKANSGGYVSFMKISIEDGDGRKGRNLTVLVIVIVIFTILIIIGLVLGFWYCYKNKHLLEDSPELLEEDDFLDSLHGMPTRFSYSTLSKATKNFSTKIGEGGFGSVYLGVLEDGSQLAVKKLEGLGQGAKEFKAEVSSIGSIHHVHLVKLKGFCAEGPHRLLVYEYMVRGSLNKWIFRTHENAFLLNWNTRFNIALGTARGLAYLHEECEVKIIHCDIKPENVLLDENFMAKVSDFGLSKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRRNYDQWEGSEKAHFPSYAFRMMEEGKLKQVLDPMIDIEENDERAFAAAKVALWCIQDDMSLRPPMTKVVQMLEGVIPVPEPPSLSSSSSYSSFLKMGSEQASSSTQASFYSNVPLSCVQLSGPR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0810 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Mibi04g0810 809 Pfam D-mannose binding lectin 83 161 IPR001480 -
Mibi04g0810 809 Gene3D - 44 152 IPR036426 -
Mibi04g0810 809 CDD B_lectin 47 153 IPR001480 -
Mibi04g0810 809 SUPERFAMILY Protein kinase-like (PK-like) 470 758 IPR011009 -
Mibi04g0810 809 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 769 - -
Mibi04g0810 809 CDD PAN_AP_plant 324 410 - -
Mibi04g0810 809 Pfam Protein kinase domain 490 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0810 809 SMART blect_4 42 153 IPR001480 -
Mibi04g0810 809 Pfam PAN domain 348 399 IPR003609 -
Mibi04g0810 809 Gene3D Transferase(Phosphotransferase) domain 1 562 761 - -
Mibi04g0810 809 Gene3D Phosphorylase Kinase; domain 1 461 561 - -
Mibi04g0810 809 FunFam S-receptor-like kinase 5 562 766 - -
Mibi04g0810 809 CDD STKc_IRAK 493 759 - -
Mibi04g0810 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 204 IPR036426 -
Mibi04g0810 809 SMART serkin_6 487 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0810 809 ProSitePatterns Protein kinases ATP-binding region signature. 493 516 IPR017441 GO:0005524
Mibi04g0810 809 ProSiteProfiles PAN/Apple domain profile. 327 410 IPR003609 -
Mibi04g0810 809 PIRSF SRK 4 805 IPR024171 GO:0004674
Mibi04g0810 809 ProSiteProfiles Bulb-type lectin domain profile. 36 152 IPR001480 -
Mibi04g0810 809 FunFam serine/threonine-protein kinase PBS1-like 456 561 - -
Mibi04g0810 809 ProSiteProfiles Protein kinase domain profile. 487 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0810 Mibi-ChrMibi04 16588319 16590748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0810 459 767 Receptor kinase-like Gene Family AT5G20050 49.080 2.96e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mibi04g0810 Pkinase 4.1e-49 CL0016