Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0804 ATGGCAGAAACTCATCTTCATGGGACTCTTCACGCCACCATTCATGAGGTGGATAAACTCAGTTGTGGTAGTGAAGATGGTGGTGGAGGTATTTTCGGCATGCTGAAGCATACGATTGAGGACACAGTTGGTGTAGGAAAAGGATCATCACAAATCTATGCAACCATTGATCTTGAGAAAGCAAGAGTGGGAAGAACAAGAGTGTTAGAAAACAATAATTCAAGTCTAAGGTGGCAAGAATCTTTCCACATCTACTGTGCCCACGTGGCATCCAACGTCATCTTCACCGTCAAAGGTGTCAACAGGATTGGCGCCACCCTAATAGGCCGAGCATATGTCCCCATTGACCACATCATCGGCGGCAATGCCTACGACGAGTGGCTCGACATCCTAGACCATGACAAGTCACCCATTGGGTCAAAAATCCACGTCAGCCTCCAATATTTTGATGTCACCAAGGACAGAAATTGGAACCGTGGCATCAAAAGTCAAAAATACCCCGGTGTGCCCTACACATTTTTCTCTCAAAGACAAGGTTGTAAGGTCACATTATACCAAGATGCCCATGTCCCTGAAAATTTCATCCCCAAAATACCCCTCTCAGGAGGCAATCATTACCAACCTCATAGATGTTGGGAGGATATTTTTGAAGCAATTAGTAATGCGAAACACTTCATTTACATCACTGGTTGGTCTGTTTACACTGAGATCAAACTAGTGAGAGATGCTAAGAGGCCTAAAGATGGAGGCCAAGTGACATTAGGTCAACTTTTGAAGAAAAAGGCAAGTGAAGGTGTTAGGGTTTTAATGCTTGTTTGGGATGATAGAACTTCTGTTAGTCTCTTAAAAAAAGATGGATTAATGGCAACACATGATGAAGAGACTGAGAAATTCTTTCAAGACTCACAAGTTCATTGTGTTTTATGCCCCCGTGACCCCGACGAGGGTGCCGGGAGTTTAATCCAAGACGTACAAGTCTCCACCATGTTCACTCATCACCAAAAGATCGTCGTCGTTGACGCCGATCTCCCAGGACAACAACGAGGAAGAAGTAAACGACGAGTAATGAGCTTTGTTGGTGGGTTAGATTTATGTGATGGACGCTATGACACGGCGTTCCATTCGCTTTTTCGTACGTTGGACACCGCTCACCACGACGATTTTCATCAACCTAACTTCGCTGGCGCCGACATAAACAAAGGTGGGCCCCGTGAGCCATGGCATGACATACATTCCCGTCTAGAGGGACCAGTTGCATGGGATGTTTTGTTTAATTTTGAACAAAGATGGAAGAAACAAGGGGGTAAGGATTTACTCATTTCGTATGGAGAACTTGACGAAATAGTTATCCCACCATCCCCGGTAACATTTCCGGAGGATCATGAGACGTGGAATGTCCAATTATTTCGATCTATCGATGGTGGAGCCGCCTTTGGGTTCCCGGAGAGCCCGGAGGAGGCGGCAGACGCCGGGCTAGTAAGTGGTAAAAACAATATAATTGATAGGAGTATACAAGATGCATATATTAATGCAATAAGAAGAGCTAGAAATTTTATATACATAGAGAATCAATATTTTCTAGGGAGTTCTTATGCATGGAGTGGTGAAAATGGGGACATAAAGCCGGAAGACATTAATGCATTACATGTGATACCTAAGGAGCTTTCATTGAAGATTGTGAGTAAGATTGAAGCCGGTGAGAGGTTTACGGTGTACGTGGTGGTTCCGATGTGGCCGGAGGGGATACCGGATAGTGGATCGGTGCAGGCGATATTGGATTGGCAAAGGAGGACAATGGATGCAATGTATAAGGATATTGTTGATGCTTTGAAGGCAAAGGGGATAAGGGAAGATCCTCGTAAGTATTTGACATTTTTTTGTCTTGGCAATAGGGAAATGAAAAGAGATGGAGAGTATGAACCACCTGAACGTCCTGAAGCGGATTCTCCTTATGAAAAAGCTCAGAGAGCTCGTCGCTTCATGATTTATGTTCATACCAAGATGATGATAGTGGATGATGAGTACATAATTGTGGGATCTGCTAACATAAACCAAAGGTCAATGGATGGATCAAGGGACACAGAGATAGCAATGGGGGCATACCAGCCATACCATTTGGCTACTAACAAGGCACCGGCAAAAGGCCAAATCCATGGATTCCGAATGGCGTTGTGGTATGAACATCTTGGGATGATGGATGACATCTTCAATAACCCAGAAAGTGAGGAATGTGTGGAGAAAGTGAACCATATGGCTGATAAATACTGGGAACTTTACGCAGATGAATCATTCAATGAAGATCTTCCTGGCCATTTGTTGCGTTATCCTGTTAACATTTCTAGGGATGGACGAGTTCAACAACTTGGTCACCATGAATTCTTCCCTGATACTCAGGCTCGTATTCTTGGGACCAAATCTGACTTCATGCCACCAATCCTTACTACTTAA 2448 0.4412 MAETHLHGTLHATIHEVDKLSCGSEDGGGGIFGMLKHTIEDTVGVGKGSSQIYATIDLEKARVGRTRVLENNNSSLRWQESFHIYCAHVASNVIFTVKGVNRIGATLIGRAYVPIDHIIGGNAYDEWLDILDHDKSPIGSKIHVSLQYFDVTKDRNWNRGIKSQKYPGVPYTFFSQRQGCKVTLYQDAHVPENFIPKIPLSGGNHYQPHRCWEDIFEAISNAKHFIYITGWSVYTEIKLVRDAKRPKDGGQVTLGQLLKKKASEGVRVLMLVWDDRTSVSLLKKDGLMATHDEETEKFFQDSQVHCVLCPRDPDEGAGSLIQDVQVSTMFTHHQKIVVVDADLPGQQRGRSKRRVMSFVGGLDLCDGRYDTAFHSLFRTLDTAHHDDFHQPNFAGADINKGGPREPWHDIHSRLEGPVAWDVLFNFEQRWKKQGGKDLLISYGELDEIVIPPSPVTFPEDHETWNVQLFRSIDGGAAFGFPESPEEAADAGLVSGKNNIIDRSIQDAYINAIRRARNFIYIENQYFLGSSYAWSGENGDIKPEDINALHVIPKELSLKIVSKIEAGERFTVYVVVPMWPEGIPDSGSVQAILDWQRRTMDAMYKDIVDALKAKGIREDPRKYLTFFCLGNREMKRDGEYEPPERPEADSPYEKAQRARRFMIYVHTKMMIVDDEYIIVGSANINQRSMDGSRDTEIAMGAYQPYHLATNKAPAKGQIHGFRMALWYEHLGMMDDIFNNPESEECVEKVNHMADKYWELYADESFNEDLPGHLLRYPVNISRDGRVQQLGHHEFFPDTQARILGTKSDFMPPILTT 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0804 815 Gene3D C2 domain 7 161 IPR035892 -
Mibi04g0804 815 FunFam Phospholipase D delta 202 447 - -
Mibi04g0804 815 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 328 368 IPR001736 GO:0003824
Mibi04g0804 815 CDD C2_plant_PLD 2 149 - -
Mibi04g0804 815 FunFam Phospholipase D 471 706 - -
Mibi04g0804 815 Gene3D Endonuclease Chain A 201 446 - -
Mibi04g0804 815 ProSiteProfiles C2 domain profile. 1 128 IPR000008 -
Mibi04g0804 815 SUPERFAMILY Phospholipase D/nuclease 492 745 - -
Mibi04g0804 815 SUPERFAMILY Phospholipase D/nuclease 152 440 - -
Mibi04g0804 815 Pfam C2 domain 38 129 IPR000008 -
Mibi04g0804 815 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 660 687 IPR001736 GO:0003824
Mibi04g0804 815 Pfam Phospholipase D Active site motif 661 687 IPR001736 GO:0003824
Mibi04g0804 815 Pfam Phospholipase D Active site motif 328 368 IPR001736 GO:0003824
Mibi04g0804 815 SMART pld_4 660 687 IPR001736 GO:0003824
Mibi04g0804 815 SMART pld_4 328 368 IPR001736 GO:0003824
Mibi04g0804 815 PIRSF PLD_plant 1 815 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Mibi04g0804 815 Pfam Phospholipase D C terminal 733 805 IPR024632 -
Mibi04g0804 815 PANTHER PHOSPHOLIPASE D 6 803 IPR015679 -
Mibi04g0804 815 Gene3D Endonuclease Chain A 475 707 - -
Mibi04g0804 815 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 151 IPR035892 -
Mibi04g0804 815 SMART C2_3c 9 127 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0804 Mibi-ChrMibi04 16529304 16533591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0804 1 815 Phospholipase D Gene Family (Wang group) AT3G15730 72.195 0.0 1275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1148 11 28663815 28667092 Mibi04g0804 04 16529304 16533591 CCT
Mibi04g0804 04 16529304 16533591 Mibi11g1148 11 28663815 28667092 ECH
Mibi05g0723 05 6832748 6836519 Mibi04g0804 04 16529304 16533591 ECH
Mibi04g0804 04 16529304 16533591 Mibi04g0804 04 16529304 16533591 ECH