Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0803 ATGGTGCAATCAAAGAAATTCAGAGGTGTCAGACAGCGTCATTGGGGCTCATGGGTTTCAGAAATCCGCCATCCTTTATTGAAAAGAAGGGTATGGCTAGGCACATTTGATACTGCAGAAGAAGCCGCAAGAGCATATGATGAAGCAGCCATTTTAATGAGTGGGAGAAACGCCAAAACAAACTTCCCAGTGACAAACAACAACAACAACAATCAAAATCACAGTTCTTCATTATCATCATCATCTTCTTCTTCCTCATCATCCTTTTCTGAAGCTCTCAGTGCAAAACTTCGAAAGTGCTGTAAATCACCATCACCATCTCTCACATGCTTGAGGCTAGACACAGAGAATTGTCACATAGGGGTGTGGCAGAAACGAGCAGGGCCTCGCTCTGACTCCAATTGGGTCATGATGGTGGAGCTTGAAAGGAAGAAACTCGAAGAAGCATCATCGGAGATGGCTAACCCGGCCACAACGACGACGACAGAGGAATTGCCGGAGCCCACGGAGAAGGTGAAGCCGGAGGAGGAGGAGGAGGAGGAAGAAGAAGAAGGGAATGGTAATGATGGGTTGGATGAGGAACAGAAAATGGCATTGCAGATGATTGAAGAATTGCTTAATAGGAACTGA 630 0.4603 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFDTAEEAARAYDEAAILMSGRNAKTNFPVTNNNNNNQNHSSSLSSSSSSSSSSFSEALSAKLRKCCKSPSPSLTCLRLDTENCHIGVWQKRAGPRSDSNWVMMVELERKKLEEASSEMANPATTTTTEELPEPTEKVKPEEEEEEEEEEGNGNDGLDEEQKMALQMIEELLNRN 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0803 209 MobiDBLite consensus disorder prediction 147 209 - -
Mibi04g0803 209 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Mibi04g0803 209 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Mibi04g0803 209 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Mibi04g0803 209 FunFam Ethylene-responsive transcription factor 2 5 64 - -
Mibi04g0803 209 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 179 - -
Mibi04g0803 209 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Mibi04g0803 209 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Mibi04g0803 209 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Mibi04g0803 209 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Mibi04g0803 209 MobiDBLite consensus disorder prediction 62 85 - -
Mibi04g0803 209 MobiDBLite consensus disorder prediction 173 189 - -
Mibi04g0803 209 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0803 Mibi-ChrMibi04 16516818 16518198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0803 1 209 AP2-EREBP Transcription Factor Family AT1G15360 63.084 5.39e-80 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi04g0803 AP2 1.8e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0803 04 16516818 16518198 Mibi04g0803 04 16516818 16518198 ECH