Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0752 ATGTCTTCCTTCACTTCCCTGTACGAGATTTTAGGGATTCCGGCCGGAGCCTCCCATCAAGAAATTAAAGTTGCCTACGGGCGATTGGCTAGGGTTTGCCATCCCGATGTGGCTGTGATGGATCGGAAGGATTCTTCGGCCAACAACTTCATGAAGATTCACGCCGCCTATTCCACTCTGTCGGATCCTCAGAAGCGAGCCACTTACGATAGGAGCTTCTTCGTCCACCGTCAGAGGCCTTTGTCCACCGCGTCCTCGTTCTCTGGCTACGGTGGCCGGAACTGGGAAACGGACCAGTGCTGGTAG 306 0.5458 MSSFTSLYEILGIPAGASHQEIKVAYGRLARVCHPDVAVMDRKDSSANNFMKIHAAYSTLSDPQKRATYDRSFFVHRQRPLSTASSFSGYGGRNWETDQCW 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0752 101 Pfam DnaJ domain 7 70 IPR001623 -
Mibi04g0752 101 CDD DnaJ 8 62 IPR001623 -
Mibi04g0752 101 SUPERFAMILY Chaperone J-domain 2 76 IPR036869 -
Mibi04g0752 101 ProSitePatterns Nt-dnaJ domain signature. 50 69 IPR018253 -
Mibi04g0752 101 PRINTS DnaJ domain signature 45 65 IPR001623 -
Mibi04g0752 101 PRINTS DnaJ domain signature 26 41 IPR001623 -
Mibi04g0752 101 PRINTS DnaJ domain signature 8 26 IPR001623 -
Mibi04g0752 101 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 4 101 - -
Mibi04g0752 101 ProSiteProfiles dnaJ domain profile. 6 73 IPR001623 -
Mibi04g0752 101 SMART dnaj_3 5 65 IPR001623 -
Mibi04g0752 101 Gene3D DnaJ domain 1 88 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0752 Mibi-ChrMibi04 15714405 15714710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0752 8 70 C2H2 Transcription Factor Family AT1G74250 41.791 8.28e-08 46.6