Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0738 ATGAGTGGGAATTCGTTAGCAGGCTTGCAAGACCACCTCAAATTGGCGAGGGAATATGCTCTTGAAGGCCTCTATGACACCTCCATTATCTTCTTTGATGGTGCAATTGCCCAGATCAACAAACACTTGAACAATGTGGATGACCCTTTATTGCGTACAAAATGGATGAATGTGAAGAAAGCTCTTTCTGAGGAAACAGAAGTAGTGAAGCAACTGGAAGCAGAGAGAAAGGCATTCAAAGAAACCCCTAGTGGTAGACGCCCTTATTCGCCTCCCATATCAGTTAAATCATCATCTTCGTCATCATTTATGTTTCAGCCATTAGATGAGTTTCCTAATTCATCATCAAGTTCAAGTGCACCTCCACCAATGGATGATCCTGATGTATGGAGGCCACCTAATAGAGATGCCCCAAGTAGAAGACCCACAAGGTCTGGTCAAATGGCAACAAGGAAGTCATCACAAGATGGGGTTTGGGCTAGAGGTGCTACTTCAAGAACAGGTGCTACTAGCCGTGGTGCAAAAGCTGGTGCCACAAGTAAAGTTAATACAGGAGCCAGGGCATCTACTTCTGGAAAGAAAGGTTCTGGTTCTGCTTCTGGGAAGTCAAGCAAGGGAGATTCAGTTAATGGTGATGCTGAAGATGGTAAGTCAAAGAAAGGACAATATGAAGGTCCTGATACTGACTTGGCTGCGATGCTTGAAAGGGATGTATTGGAAAGCACTCCTGGAGTGAGGTGGGATGATGTTGCGGGGCTGACTGAAGCCAAACGACTTCTAGAAGAAGCTGTTGTGCTTCCCTTATGGATGCCTGAATATTTCCAGGGGATTAGAAGACCATGGAAAGGTGTTCTCATGTTTGGTCCTCCAGGAACCGGGAAGACACTGTTAGCCAAAGCAGTTGCTACTGAATGTGGTACCACATTCTTCAATGTTTCTTCTGCTACTTTAGCTTCAAAGTGGCGTGGAGAGAGTGAGCGTATGGTGCGATGCTTGTTTGATCTTGCTAGAGCATATGCTCCGAGCACAATTTTCATTGATGAGATTGATTCCTTGTGTAATGCTAGGGGGGCATCTGGGGAACATGAATCATCAAGAAGGGTGAAATCTGAACTTCTTGTTCAGGTTGACGGTGTGAGCAATAGTTCCACGAATGAAGATGGTAGTAGGAAAATAGTAATGGTCTTGGCAGCCACCAACTTCCCTTGGGACATAGATGAGGCACTGAGGAGAAGGCTGGAAAAACGTATTTACATTCCTCTTCCTAATTTTGAGAGCCGTAAAGAGCTGATCCGGATTAATTTAAAGACTGTAGAGGTGGCTCCTGATGTAAATATAGATGAAGTGGCTCGCCGGACAGAGGGCTATAGTGGAGATGATCTGACGAATGTCTGCCGTGATGCTTCTCTGAACGGTATGAGGCGTAAGATAGCAGGGAAGACTCGGGACGAGATAAAGAACATGCCCAAGGATGAGATATCAAAGGACCCTATAGCCATGTGTGATTTTGAAGAAGCTTTGGTAAAGGTCCAGCGAAGTGTTTCGCAGGCTGACATTGAGCGCCATGAGAAATGGTTTTCTGAGTTTGGATCAGCATAA 1599 0.4528 MSGNSLAGLQDHLKLAREYALEGLYDTSIIFFDGAIAQINKHLNNVDDPLLRTKWMNVKKALSEETEVVKQLEAERKAFKETPSGRRPYSPPISVKSSSSSSFMFQPLDEFPNSSSSSSAPPPMDDPDVWRPPNRDAPSRRPTRSGQMATRKSSQDGVWARGATSRTGATSRGAKAGATSKVNTGARASTSGKKGSGSASGKSSKGDSVNGDAEDGKSKKGQYEGPDTDLAAMLERDVLESTPGVRWDDVAGLTEAKRLLEEAVVLPLWMPEYFQGIRRPWKGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAPSTIFIDEIDSLCNARGASGEHESSRRVKSELLVQVDGVSNSSTNEDGSRKIVMVLAATNFPWDIDEALRRRLEKRIYIPLPNFESRKELIRINLKTVEVAPDVNIDEVARRTEGYSGDDLTNVCRDASLNGMRRKIAGKTRDEIKNMPKDEISKDPIAMCDFEEALVKVQRSVSQADIERHEKWFSEFGSA 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0738 532 FunFam Katanin p60 ATPase-containing subunit A1 422 508 - -
Mibi04g0738 532 Gene3D - 3 80 - -
Mibi04g0738 532 FunFam Katanin p60 ATPase-containing subunit A1 242 410 - -
Mibi04g0738 532 MobiDBLite consensus disorder prediction 208 226 - -
Mibi04g0738 532 SMART AAA_5 280 423 IPR003593 -
Mibi04g0738 532 Gene3D - 422 508 - -
Mibi04g0738 532 Hamap Meiotic spindle formation protein mei-1 [mei-1]. 7 532 IPR028596 GO:0008017|GO:0008568|GO:0051013
Mibi04g0738 532 Coils Coil 62 82 - -
Mibi04g0738 532 CDD AAA 278 421 - -
Mibi04g0738 532 Pfam AAA+ lid domain 443 484 IPR041569 -
Mibi04g0738 532 PANTHER AAA DOMAIN-CONTAINING 25 531 - -
Mibi04g0738 532 ProSitePatterns AAA-protein family signature. 393 412 IPR003960 GO:0005524|GO:0016887
Mibi04g0738 532 FunFam Katanin p60 ATPase-containing subunit A1 4 80 - -
Mibi04g0738 532 MobiDBLite consensus disorder prediction 91 122 - -
Mibi04g0738 532 Pfam ATPase family associated with various cellular activities (AAA) 284 421 IPR003959 GO:0005524|GO:0016887
Mibi04g0738 532 Gene3D - 242 523 IPR027417 -
Mibi04g0738 532 MobiDBLite consensus disorder prediction 140 207 - -
Mibi04g0738 532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 243 529 IPR027417 -
Mibi04g0738 532 MobiDBLite consensus disorder prediction 79 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0738 Mibi-ChrMibi04 15102074 15105834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0738 223 524 Calmodulin-binding Proteins AT3G56690 39.286 4.07e-51 186