Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0737 ATGTCGCCGGAGAGTACAAGCACCGACCGGTCCGACGTCACGGAGGAGTTGAACCTGAAGGAGACAGAGCTCACCCTAGGCCTTCCTGGAGCCACCAATAATACCACTACTACCTCTAAACGTGCCTTCTCCGAAACCACCGTTTTCAGCCCAACTTCATCATCAACTAGTACCCTGACTCCCAAGGTGCAAGCAATTGGGTGGCCGCCGGTGAGGGCAAGCCGGAAAAACGTGATGAAGAGCTGCAAGTATGTGAAGGTGGCTGTGGACGGAGCTCCATATTTGAGGAAGGTAGATCTTGAGAAGCATGAGAGCTATGATCAGCTGCTAACGGGTTTAGAGGCCATGTTTGGTTCCTTGACAATTCGCAATCATTTGAATGAGAAGAAGAAGATGGACCTTGGGAATGGAGCAGAGTACGTGCCCACTTATGAGGACAAAGACGGTGACTGGATGCTCGTGGGAGATGTACCTTGGAAGATGTTTGTTGAATCCTGCAAAAGAATTAGGTTGATGATAAAGTCAGAAGCCAGTGGCTTAGGAATTGGAAGAACAGACGAGATGAAGATGAAGGAGAAAACGTGTGGTAATTAA 594 0.4882 MSPESTSTDRSDVTEELNLKETELTLGLPGATNNTTTTSKRAFSETTVFSPTSSSTSTLTPKVQAIGWPPVRASRKNVMKSCKYVKVAVDGAPYLRKVDLEKHESYDQLLTGLEAMFGSLTIRNHLNEKKKMDLGNGAEYVPTYEDKDGDWMLVGDVPWKMFVESCKRIRLMIKSEASGLGIGRTDEMKMKEKTCGN 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0737 197 Gene3D - 76 186 - -
Mibi04g0737 197 SUPERFAMILY CAD & PB1 domains 74 173 - -
Mibi04g0737 197 Pfam AUX/IAA family 51 181 IPR033389 -
Mibi04g0737 197 FunFam Auxin-responsive protein 77 184 - -
Mibi04g0737 197 ProSiteProfiles PB1 domain profile. 82 176 IPR000270 GO:0005515
Mibi04g0737 197 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 17 179 IPR003311 GO:0005634|GO:0006355
Mibi04g0737 197 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0737 Mibi-ChrMibi04 15084586 15085710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0737 86 192 B3 DNA Binding Superfamily AT4G23980 30.841 6.77e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi04g0737 AUX_IAA 1.9e-45 CL0072