Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0736 ATGGCTCTTGGATTTGAAATCACGGAGCTAAGGTTGGGTCTTCCAGGAGGCAGTGGGGATGGCCAGCCCAGTGTGGAGGTGGTGGATAAGAGTGCTGAGATGACTAAGAAGAGGGTGTTCTCAGAGATTGGTCGTGTTAATGGCGGTGTTGGTGGTGGTGATGGTGAGAATAGCAGCTCTGGTGACCAGAAAACACCGGCGAAGAGCCTGGTTGTAGGGTGGCCACCTGTGGGGTCGTACCGAAGGAGGAATAGTATGAGTGAACCTAAAATTTACGTGAAGGTTAGTATGGATGGTGCTCCTTTCTTGCGCAAGGTTGATTTGGGTTTGCAAAAGGATTACTCTGAGTTAGCTTCAGCCTTGAAGAAGCTCTTTGATTGCCGTGGAATCCGGGAGGCACTGAAGGGAGTGGAGAATTCTGAAGTCGTTCCCATTTATGAGGACAAGGATGGTGACTGGATGCTTGTTGGAGATGTCCCTTGGGAAATGTTTATAGAGTCATGCAAGAGGCTGAGGATCATGAAGAAATCGGAGGCAAAAGGGTTTGATCTGCAGCCAAAAGGGTCTTTGAAAGGCAAAACAAAGTGA 588 0.4881 MALGFEITELRLGLPGGSGDGQPSVEVVDKSAEMTKKRVFSEIGRVNGGVGGGDGENSSSGDQKTPAKSLVVGWPPVGSYRRRNSMSEPKIYVKVSMDGAPFLRKVDLGLQKDYSELASALKKLFDCRGIREALKGVENSEVVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKKSEAKGFDLQPKGSLKGKTK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0736 195 Pfam AUX/IAA family 8 182 IPR033389 -
Mibi04g0736 195 ProSiteProfiles PB1 domain profile. 90 176 IPR000270 GO:0005515
Mibi04g0736 195 MobiDBLite consensus disorder prediction 44 68 - -
Mibi04g0736 195 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 180 IPR003311 GO:0005634|GO:0006355
Mibi04g0736 195 SUPERFAMILY CAD & PB1 domains 84 175 - -
Mibi04g0736 195 FunFam Auxin-responsive protein 85 186 - -
Mibi04g0736 195 Gene3D - 85 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0736 Mibi-ChrMibi04 15070090 15072434 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0736 93 180 B3 DNA Binding Superfamily AT4G23980 43.182 1.35e-12 63.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi04g0736 AUX_IAA 7.4e-43 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0736 04 15070090 15072434 Mibi11g1191 11 29220227 29224467 CCT