Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0725 ATGTTGCTTCTTGTTAAATGCACCCGGCTCACGGGCTTGCTGTTTGTTCTGTGGATTTACTTCCTAGTAGTTGTATTTCATTTTGAAATGGATGATAATGAGGGTGATGCAAAGTATGCTTCTAATCCATATGATGTGAGTCATGACCGAGGCTATGGTTATTTGAATAGTCAGAAACTTCCAGTTGGGAGTTCTCAACGTTCTCAGCCAGTTAAAAGTGGGTATGCTGAAGATGATAATGATTATGTGGAGGAAGACAACGGAGAACAGTTAGAACAGGAGGAGGAGGAGGAGGAGGAGGAGGAAGATGATGATGGTGATGTTGATATCGATCAAGGTGATGATAACCAAGTTCCCCAGAAAGATGGCGATGATAATGTTGATGACGAAGAAGAAGATGGCATTGATGGGGATGGGGATGGGGATGGGGATGATAGTGATGATGACAGTGCTGCTGCTGCTGATGATGATGATAAGCAGAAACGTTACACTATAAGGATTGGAGATGATTTAGAATCTCATCCAAAAAAGAGAAAGTTGAAGAGTTTGATTTCAGCTTATGAATTTGCGCCTCGTGTACCTGTGCCAGCAGCTGCGGCTCCTGTAGCTCCTAAACCATCATTTGGTGGCAGAAATTCCCTTACTGACTGGACTGAGCGCGAAACATTTGTCCTTCTCGATGCTTGGGGTGAGCGGTTTATTCAACGTGGAAAAAAGAGTCTTCGGTCTGAGGAATGGCAAGAAGTTGCTGAAAGGGTAAAGGAAATTTCAAAAGTTGAAAGGACAGATACACAGTGTAGGAATAGACTTGACACATTAAAGAAAAAGTACAAAAAGGAGAAGGCTAAATTCGCAGAAATAGGCAGTGGAACCAGCAAATGGATTTATTTCAGTAGGATTGATAAGCTTTTGTCCTCTCCTCAACAACAAACTGGTCTATCTTGTGGGTTGGACTCAGGAGAGTATGTTTTCTCGAACCCTCGAGTTTATTTGAACCGTGCAAATGTGTTTGATGAAATGAGGGATAGTCCAGGGAATTCAGAGTCTACTGGCGATGAAGATTCAGTTGGACTTCAACCAAAGAAAAAATGTTCTAAAAGGAACAATGACGAAACTTCTTCCTTCAAGTTACTTGCCGATTCCATTCAGAAATTCAGTGAGATATATGAGAAGATCGAAAATAACAAAAGGCAACAGATGGCAGAACTAGAAAAGATGAGGATGGAATTCCACAAGGAATTGGAAATGCAGAAGCGGCAAATTTTCGAGAAAGTCCAGAACGAGATTGCAAAACTGCAGCAGAGAGATGAGGAGAATGATGAATCTGCTGAGAACGTGAAACTGTCCATAACTGTGTGGATTAAATGA 1368 0.4167 MLLLVKCTRLTGLLFVLWIYFLVVVFHFEMDDNEGDAKYASNPYDVSHDRGYGYLNSQKLPVGSSQRSQPVKSGYAEDDNDYVEEDNGEQLEQEEEEEEEEEDDDGDVDIDQGDDNQVPQKDGDDNVDDEEEDGIDGDGDGDGDDSDDDSAAAADDDDKQKRYTIRIGDDLESHPKKRKLKSLISAYEFAPRVPVPAAAAPVAPKPSFGGRNSLTDWTERETFVLLDAWGERFIQRGKKSLRSEEWQEVAERVKEISKVERTDTQCRNRLDTLKKKYKKEKAKFAEIGSGTSKWIYFSRIDKLLSSPQQQTGLSCGLDSGEYVFSNPRVYLNRANVFDEMRDSPGNSESTGDEDSVGLQPKKKCSKRNNDETSSFKLLADSIQKFSEIYEKIENNKRQQMAELEKMRMEFHKELEMQKRQIFEKVQNEIAKLQQRDEENDESAENVKLSITVWIK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0725 455 MobiDBLite consensus disorder prediction 340 370 - -
Mibi04g0725 455 MobiDBLite consensus disorder prediction 58 73 - -
Mibi04g0725 455 MobiDBLite consensus disorder prediction 79 112 - -
Mibi04g0725 455 Coils Coil 382 435 - -
Mibi04g0725 455 ProSiteProfiles Myb-like domain profile. 217 274 IPR001005 -
Mibi04g0725 455 Pfam Myb/SANT-like DNA-binding domain 216 303 IPR044822 -
Mibi04g0725 455 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 206 438 IPR044823 -
Mibi04g0725 455 Gene3D - 217 279 - -
Mibi04g0725 455 MobiDBLite consensus disorder prediction 124 153 - -
Mibi04g0725 455 MobiDBLite consensus disorder prediction 55 178 - -
Mibi04g0725 455 Coils Coil 83 104 - -
Mibi04g0725 455 MobiDBLite consensus disorder prediction 154 178 - -
Mibi04g0725 455 MobiDBLite consensus disorder prediction 355 370 - -
Mibi04g0725 455 FunFam trihelix transcription factor ASIL2 217 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0725 Mibi-ChrMibi04 14595513 14597804 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0725 342 435 Trihelix Transcription Factor Family AT3G14180 39.423 2.33e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mibi04g0725 Myb_DNA-bind_4 5.7e-20 CL0123