Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0666 ATGCAATTAGAGCATTTGAAGGCTATAAGAAGTCGCTTAGGTTTAAGATTCGAGAAGCAACACCTTAGACTTAGAGGAAAAGATGGAACAACATTGGACTGGGCAGCAAGGATTAAAATTGCTATTGGATCTGCAAAGGGATTGGCATATCTGCATGAAGACTGTCACCCAAAAATCATACATCGTGACATCAAGGCATCTAACATTCTTCTTGATGACAATTTTGAGGCCAAGGCAAGACCTTTACTTTGTCAAGCTATGGAAGATGGCAACTTTGATGCTCTTGCTGATCCAAGGTTGCAGAAGAGTTATGACTCTGGTGAGATGCGTCGAATGATTGCCTGTGCTATAAATTGTGTGCGCAATTCAACTGGACAACGGCCCCGAATGAGCCAGGGCACAGCAGAGCAAGAATTTATTGAATACGGTGGGGAACAGCAGTCTGCCTCAAGCAGTTCAAGCCTGCAAAATGCATCAAAGAAATAG 486 0.4321 MQLEHLKAIRSRLGLRFEKQHLRLRGKDGTTLDWAARIKIAIGSAKGLAYLHEDCHPKIIHRDIKASNILLDDNFEAKARPLLCQAMEDGNFDALADPRLQKSYDSGEMRRMIACAINCVRNSTGQRPRMSQGTAEQEFIEYGGEQQSASSSSSLQNASKK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0666 161 SUPERFAMILY Protein kinase-like (PK-like) 28 78 IPR011009 -
Mibi04g0666 161 ProSitePatterns Serine/Threonine protein kinases active-site signature. 59 71 IPR008271 GO:0004672|GO:0006468
Mibi04g0666 161 MobiDBLite consensus disorder prediction 141 161 - -
Mibi04g0666 161 Pfam Protein tyrosine and serine/threonine kinase 24 77 IPR001245 GO:0004672|GO:0006468
Mibi04g0666 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0666 161 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 79 133 - -
Mibi04g0666 161 MobiDBLite consensus disorder prediction 124 161 - -
Mibi04g0666 161 Gene3D Transferase(Phosphotransferase) domain 1 19 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0666 Mibi-ChrMibi04 13159430 13162857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0666 24 78 Trihelix Transcription Factor Family AT1G70460 76.364 5.84e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi04g0666 PK_Tyr_Ser-Thr 1.4e-06 CL0016