Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0665 ATGGAGGTTACAACTTGCAACTCACGAATAAAAGAGTTATCCAGCCAAATGGCCCATAGTGGTGGAAGCCCGTTGCTGCTTAGAGCCCCACAGTCACAAAGGAGGGCCCAGCAACATTCGTTAGCTCCCACTGTTCCTTCCCAGCAAGCACAACGAGCTGAACGAGAGAAAAATTCAGCGGTATCTAATTATGTGATGAAACCTATTGGATTGAGGTACTCCTCGACTCCATTGTACTGCTTCCTCGGGGAAAAAGTTTCTATATTAAACGACGCACGAAGAAATGATGGAACAACATTGCACTGGGCAGCAAGGATTAAAATTGCTGTTGGATCTGCAAAGGGATTGGCATATCTGCATGAAGACTGTCACCCAAAAATCATACATCGTGACATCAAGGCATCTAACATTCTTCTTGATGACAATTTTGAGGCCAAGGCAAGACCTTTACTTTCTCAAGCTATGGAAGATGGCAACTTCGATGCTCTTGCTGATCCAAGGTTGCAGAAGAGTTATGACCCCGGTGAGATGCGTCGAATGATTGCCTGTGCTGTAAATTGTGTGCGCAATTCAGCTAGACAACGGCCCCGAATGAGCCAGGTAGTTCAAGCTCTTGAAAGGAATATTTCTTTGGATGATCTGAATGAGGGGGAAGCACAACAGGGCACAGCAGAGCAAGAATCTATTGAATGCAGCGGGGAACATCAGTCTGCCTCAAGCAGTTCAGGCCTGCAAAATTCATCAGAGAAATAG 753 0.4582 MEVTTCNSRIKELSSQMAHSGGSPLLLRAPQSQRRAQQHSLAPTVPSQQAQRAEREKNSAVSNYVMKPIGLRYSSTPLYCFLGEKVSILNDARRNDGTTLHWAARIKIAVGSAKGLAYLHEDCHPKIIHRDIKASNILLDDNFEAKARPLLSQAMEDGNFDALADPRLQKSYDPGEMRRMIACAVNCVRNSARQRPRMSQVVQALERNISLDDLNEGEAQQGTAEQESIECSGEHQSASSSSGLQNSSEK 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0665 250 MobiDBLite consensus disorder prediction 212 250 - -
Mibi04g0665 250 Pfam Protein tyrosine and serine/threonine kinase 89 145 IPR001245 GO:0004672|GO:0006468
Mibi04g0665 250 SUPERFAMILY Protein kinase-like (PK-like) 93 205 IPR011009 -
Mibi04g0665 250 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 96 146 - -
Mibi04g0665 250 MobiDBLite consensus disorder prediction 34 59 - -
Mibi04g0665 250 Gene3D Transferase(Phosphotransferase) domain 1 87 147 - -
Mibi04g0665 250 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Mibi04g0665 250 ProSiteProfiles Protein kinase domain profile. 1 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0665 250 MobiDBLite consensus disorder prediction 34 58 - -
Mibi04g0665 250 MobiDBLite consensus disorder prediction 214 250 - -
Mibi04g0665 250 Gene3D Transferase(Phosphotransferase) domain 1 148 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0665 Mibi-ChrMibi04 13145146 13153233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0665 147 217 Trihelix Transcription Factor Family AT1G70460 49.296 4.52e-15 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi04g0665 PK_Tyr_Ser-Thr 1.3e-06 CL0016