Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0659 ATGGCGGCCATATTGCCGTCTCCTCTCCTACTACATAGCGCAGGCAGACTATTCATTGGGGCTTTGATTAGTGCACTGATGACTTTGATGATGATGACTTTGCATTCATTAATATCACCTTCTCTTGCAGCTGAAGATGTTGCAGATTCACTTCTACCATCTTCCATGATCTTTGATGCACACTCATCAGGCACATTTACATATGAAGAATTAGAATTGCCAACATATGGATTCTCGGAGTCAAATTTTCTGGGGCAAGGTGGTTTTGGAACTGTCCATAAAGGAGTTCTCTATGGTAAAACTGTGGCCGTTAAGCAGCAAAAATCTGGAAGTAAACAGGGAATGCAAGAGTTCCAAACTGAAGTGCAGGTCATTAGTCGAGTTCATCACAGACATCTTGTTTCCCTTGTTGGATATTGCATTGCTAAAGCTCAAATGACGTTGATGCTTGTTTATGAGTTTGTCCCTAATAAAGCCTTAGACTTCCATCTCCATGGAAAAGGAACAGAAACCCTAGACTGGTCAACGAGGATGAAGATTGCTTATGGCTCTGCAAAAGGATTGGCATATCTGCACGAAGACTGTAAACCCAAAATCATCCATCGTGACATCAAGGCAGCTAACATTCTTCTTGATAACAATTTTGAGCCAAAGATTGCAGATTTTGGACTTGCCAAACTTTCATCAGACACTGAAACCCATGTCTCTACAGCTAAAGTAAAGGGAACCTTTGGATACTTAGCTCCAGAATATGCAAATAGTGGGAGACTCTCAGAGAAGTCAGATGTGTTCTCTTTTGGTGTTGTGCTTTTAGAGTTGATTACTGGACGAAAACCTGTTCTTCAAACTGGTTCTTTCGCAGATGACAGTCTCGTTGAGTGGGCAAGACCTTTACTCACCACAGCTTTGGGGAATCGAAATTTTGAGGTTCTTGCTGATGCAAGGTTGCATAATGATTACGACTCCGAAGAGATGTTTCGAATGGCTTCTTGTGCTGCAAATTGTGTGATTCATTCAGATAACCGTCGTCCTCGAATGAGCCAGGTAGCGGATGCTTTAGGTGGAAAGATTAGTCTGGACAACTGGAAGGAGGAGAGCACACAAGTGGACATGAACCAGTTTTGGAATGAGTCAATAGGCGAATACATTGAGCCTACCTTCAGTTCAATCCGCCAAAATACAACAAATGAAGCCTATGACTCAGCTTCTGGTTAA 1215 0.423 MAAILPSPLLLHSAGRLFIGALISALMTLMMMTLHSLISPSLAAEDVADSLLPSSMIFDAHSSGTFTYEELELPTYGFSESNFLGQGGFGTVHKGVLYGKTVAVKQQKSGSKQGMQEFQTEVQVISRVHHRHLVSLVGYCIAKAQMTLMLVYEFVPNKALDFHLHGKGTETLDWSTRMKIAYGSAKGLAYLHEDCKPKIIHRDIKAANILLDNNFEPKIADFGLAKLSSDTETHVSTAKVKGTFGYLAPEYANSGRLSEKSDVFSFGVVLLELITGRKPVLQTGSFADDSLVEWARPLLTTALGNRNFEVLADARLHNDYDSEEMFRMASCAANCVIHSDNRRPRMSQVADALGGKISLDNWKEESTQVDMNQFWNESIGEYIEPTFSSIRQNTTNEAYDSASG 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0659 404 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 55 154 - -
Mibi04g0659 404 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 50 373 - -
Mibi04g0659 404 FunFam proline-rich receptor-like protein kinase PERK8 155 368 - -
Mibi04g0659 404 SUPERFAMILY Protein kinase-like (PK-like) 60 353 IPR011009 -
Mibi04g0659 404 ProSiteProfiles Protein kinase domain profile. 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0659 404 CDD STKc_IRAK 84 353 - -
Mibi04g0659 404 Pfam Protein tyrosine and serine/threonine kinase 82 351 IPR001245 GO:0004672|GO:0006468
Mibi04g0659 404 ProSitePatterns Protein kinases ATP-binding region signature. 84 105 IPR017441 GO:0005524
Mibi04g0659 404 SMART serkin_6 78 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0659 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mibi04g0659 404 Gene3D Phosphorylase Kinase; domain 1 54 154 - -
Mibi04g0659 404 Gene3D Transferase(Phosphotransferase) domain 1 155 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0659 Mibi-ChrMibi04 12608597 12613299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0659 66 379 Trihelix Transcription Factor Family AT1G70460 61.250 1.90e-128 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi04g0659 PK_Tyr_Ser-Thr 6.4e-48 CL0016