Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0658 ATGTTTTGTACACCTCAAGAATATCCATGGCGGCCACATTGCCGCCTCCTCTCCTACTTCATAGTTTACCACTCACAGTCGCCTTTCCCTTCGCCCTCGCCTTCTCCTTCTCCTTCTCCTTCTCCCTCGCCGCCTTCGCAGACTCCCCCAGCCAAAAATATTACTATTACCTCTCCAGGTTCGGGATCAGGCTCAGGCAGACTATTCATTGGGGCTTTGATTAGTGCACTGATAACTTTGGTGATGACGACTTTGTTTTTCATTGGCGTAATTTACTATCTCCGGAGAAGGAAGAAGCACTCCCCAAAACGACCAAAACAAGGAGATTCACTTCTACCATCTTCCATGACCTTTCATCCACACTCACTAGGAACATTTACATATGAAGAATTAGAATTGGCAACAGATGGATTCTCGGAGTCAAATTTTCTGGGGCAAGGTGGTTTTGGAACTGTCCATAAAGGAGTTCTCTCTGGTAAAACTGTGGCCGTTAAGCAGCAAAAATCTGGAAGAAAAGGCACAGAAACTCTGGACTGGTCAACAAGGATGAAGATTGCTTATGGCTCTGCAAAAGGATTGGCATATCTGCACGAAGACTGTGAACCCAAAATCATACATCGTGACGTCAAGGCAGCTAACATTCTTCTTAATAACAATTTTGAGCCAAAGATTGCAGATTTCGGACTTGCCAAACTTTCATCAGACACTGAAACCCATGTCTCTACAGCTAAAGTAAAGGGAACCTTTGGATACTTAGCTCCAGAATATGCAAATAGCGGGAGACTCTCAGAGAAATCGGATGTGTTCTCTTTTGGTGTTGTGCTTTTAGAGCTGATAACTGGACGTAAACCTGTTCTTCAAACTGGTTCTTTCTCAAATGACTATCTCGTTGAGTGGGCAAGACCTTTACTCAACACAGCTTTGGAGAATAGAAATTTTGAGGTTCTTGCTGATGCACGGCTGCAGAATGATTACGACTCCGAAGAGATGTTTCGAATGGCTTCTTGTGCTGCCAATTGTGTGATCCATTCACATAACTGTCGTCCTCGAATGAGCCAGGTTAGTGATTCAGTTATGTTAAAACATGTTTTTAACATGATTTAA 1104 0.4339 MFCTPQEYPWRPHCRLLSYFIVYHSQSPFPSPSPSPSPSPSPSPPSQTPPAKNITITSPGSGSGSGRLFIGALISALITLVMTTLFFIGVIYYLRRRKKHSPKRPKQGDSLLPSSMTFHPHSLGTFTYEELELATDGFSESNFLGQGGFGTVHKGVLSGKTVAVKQQKSGRKGTETLDWSTRMKIAYGSAKGLAYLHEDCEPKIIHRDVKAANILLNNNFEPKIADFGLAKLSSDTETHVSTAKVKGTFGYLAPEYANSGRLSEKSDVFSFGVVLLELITGRKPVLQTGSFSNDYLVEWARPLLNTALENRNFEVLADARLQNDYDSEEMFRMASCAANCVIHSHNCRPRMSQVSDSVMLKHVFNMI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0658 367 MobiDBLite consensus disorder prediction 31 59 - -
Mibi04g0658 367 MobiDBLite consensus disorder prediction 31 49 - -
Mibi04g0658 367 ProSiteProfiles Protein kinase domain profile. 54 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0658 367 FunFam proline-rich receptor-like protein kinase PERK8 159 365 - -
Mibi04g0658 367 SMART serkin_6 138 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0658 367 ProSitePatterns Protein kinases ATP-binding region signature. 144 165 IPR017441 GO:0005524
Mibi04g0658 367 Pfam Protein tyrosine and serine/threonine kinase 174 355 IPR001245 GO:0004672|GO:0006468
Mibi04g0658 367 SUPERFAMILY Protein kinase-like (PK-like) 115 357 IPR011009 -
Mibi04g0658 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mibi04g0658 367 Gene3D Transferase(Phosphotransferase) domain 1 173 366 - -
Mibi04g0658 367 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 82 172 - -
Mibi04g0658 367 Gene3D Transferase(Phosphotransferase) domain 1 122 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0658 Mibi-ChrMibi04 12574562 12578635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0658 40 354 Trihelix Transcription Factor Family AT1G68690 42.040 1.74e-87 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mibi04g0658 PK_Tyr_Ser-Thr 3.3e-27 CL0016