Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0645 ATGGGCGTGGACATGTCCAATAACCCACCTCCATCTTCGCACACTAAAGACTTTTTTGCTTCTCCAGCTCTCTCTCTAAGCCTTGCTGGGATTTTCCGGCATGCCGGAGAAGCTGCGGCGGCGGCCGGAGCAGCCGAGTCCAGCAGGGATGTGGAGGAGGGAGATGAAGGTAGCGGCGGAGGCCGGCGAGATGATACAGTGGAGATTAGTAGTGAGAATTCCGGCCACACAAGATCCAGATCGGACGATATTGATTTTGAAGGTGAAGGAGAACATGACGACGGCGACGACGGCGGAGACGGAGATAAGAATAAGAAGAAGAAGAGGAAGAAGTATCATAGGCATACTGCTGAACAAATCAGAGAAATGGAAGCGCTTTTCAAAGAGTCACCTCATCCTGATGAAAAGCAAAGGCAACAACTTAGCAAGCAATTGGGCCTTGCTCCTAGGCAAGTCAAGTTCTGGTTCCAGAATCGTCGAACCCAAATCAAGGCAATACAAGAACGTCATGAGAATTCATTGTTGAAGACAGAGATCGATAAACTGAGAGAAGAAAACAAGCAAATGAGAGAGACGATAAACAAATCTTGCTGCCCAAACTGTGGCACAGCCACCACCACCAGAGACACCCTCTTGTCCTCCGAAGAACAACAACTTCGCATCGAAAATGCCAAACTCAAAGCTGAGGTGGAGAAGTTAAAGGCGGTGATAGGGAAATACCCACAAGGGACGGCGGCGGCGCCGTCATGTTCAGGCGGCCGAGGGAACGAGCAAGAGAACAGGAGCTCATTGGAGTTCTACACAGGAATATTTGGGGTGGACAAGACAAGGATAATGGAGATAGTGAATGGGGCTGTGGAGGAAGTGGTGAAAATGGGGAGTATGGGAGAACCATTGTGGGTTCGGAGTTTAGAGACTGATCGTGAGATACTAAACTATGATGAGTATGTGAAGGAGTTTGGGAACAACAAAGTTGTTGAAGGCTCTTCTTCTTCTTCTACATCGAGTAGGCCCATGAAAAGATTGTCCATTGAAGCTTCTAGAGAAACTGGCCTTGTTTTTGTTGATCTCCCTCGCCTTATTCAGAGATTCTTAGATGTGAATCAATGGAAGGAGATGTTTCCATGCTTGATATCAAAAGCAGCAACTGTGGATGTGATTTGCAGCGGAGAAGGAGCCAACAGAAATGGTGCGGTTCATCTGATGTTTGCAGAACTTCAAATGCTAACACCAATGGTGGGCACGAGAGAGGTGTATTTCGTGAGGTACTGCAAGCAACTCAGTGCAGAGCAGTGGGCAATCGTGGATGTGTCAGTGGACAAGGTTGAAGACAACATCGACGCCTCCCTTGTTAAATGTCGAAAACGCCCCTCTGGCTGCATTATTGAAGACAAGTCTAACGGCCATTGCAAGGTGACATGGGTGGAGCACTTGGAATGCCAGAAGAGCACAGTGCACACATTGTTCCGCACCATTGTAAACAGTGGCATGGCTTTTGGTGCAAGACATTGGGTTGCCACCCTCCAACTTCAATGTGAACGTCTCGTTTTCTTCATGGCCACCAATGTTCCCATGAAAGATTCAACCGGAGTTGCTACTTTAGCAGGAAGGAAGAGCATTTTGAAGCTGGCGCAGAGAATGACATGTAATTTTTGCCATGCCATTGGAGCTTCAAGCTTCCATACGTGGAATAAGGTGACCAGCAAAACAGGGGAAGACATCAGAATAAGTTCTAGGAAGAATTTGAATGATCCTGGGGAACCTTTAGGAGTGATCTTGTGTGCAGTTTCTTCTGCGTGGCTTCCAGTTTCTCCTAATGTTCTGTTCGATTTCTTGAGGGATGAAGCTCGCAGATCTGAGTGGGATATAATGTCCAATGGTGCTTCAGTACAATCTATAGCAAACTTAGCCAAAGGACAAGATCGAGGCAATTCAGTGAACATCCAAACAATTAAATCAAAAGAGAACAGCATGTGGGTACTACAAGATAGCTGCACAAATGCATATGAATCAATGGTGGTGTATGCTCCAGTTGATATCAGTGGGATGCAGTCTGTGATGACAGGATGTGACTCTAGCAATCTAGCCATACTTCCCTCAGGCTTCTCAATTCTACCTGATGGGTTGGATGCAAGACCATTGGTCATAACTTCAAGGGAAGAAGAGAGAAACACAGAAGGAGGGTCTTTGCTCACAATGGCTTTCCAAGCTCTTACTAATACATCTCCTACAGCTAAGCTAACTATGGAGTCTGTGGAATCTGTCAACACCCTCATATCTTGTACATTAAGAAATATCAGAACCAGTTTACAATGTGAGGATGGTTGA 2328 0.4639 MGVDMSNNPPPSSHTKDFFASPALSLSLAGIFRHAGEAAAAAGAAESSRDVEEGDEGSGGGRRDDTVEISSENSGHTRSRSDDIDFEGEGEHDDGDDGGDGDKNKKKKRKKYHRHTAEQIREMEALFKESPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKTEIDKLREENKQMRETINKSCCPNCGTATTTRDTLLSSEEQQLRIENAKLKAEVEKLKAVIGKYPQGTAAAPSCSGGRGNEQENRSSLEFYTGIFGVDKTRIMEIVNGAVEEVVKMGSMGEPLWVRSLETDREILNYDEYVKEFGNNKVVEGSSSSSTSSRPMKRLSIEASRETGLVFVDLPRLIQRFLDVNQWKEMFPCLISKAATVDVICSGEGANRNGAVHLMFAELQMLTPMVGTREVYFVRYCKQLSAEQWAIVDVSVDKVEDNIDASLVKCRKRPSGCIIEDKSNGHCKVTWVEHLECQKSTVHTLFRTIVNSGMAFGARHWVATLQLQCERLVFFMATNVPMKDSTGVATLAGRKSILKLAQRMTCNFCHAIGASSFHTWNKVTSKTGEDIRISSRKNLNDPGEPLGVILCAVSSAWLPVSPNVLFDFLRDEARRSEWDIMSNGASVQSIANLAKGQDRGNSVNIQTIKSKENSMWVLQDSCTNAYESMVVYAPVDISGMQSVMTGCDSSNLAILPSGFSILPDGLDARPLVITSREEERNTEGGSLLTMAFQALTNTSPTAKLTMESVESVNTLISCTLRNIRTSLQCEDG 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0645 775 SMART HOX_1 108 170 IPR001356 GO:0003677
Mibi04g0645 775 FunFam Homeobox-leucine zipper protein HDG1 94 182 - -
Mibi04g0645 775 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 107 770 IPR042160 -
Mibi04g0645 775 MobiDBLite consensus disorder prediction 36 118 - -
Mibi04g0645 775 MobiDBLite consensus disorder prediction 48 86 - -
Mibi04g0645 775 Gene3D - 99 178 - -
Mibi04g0645 775 SUPERFAMILY Bet v1-like 544 761 - -
Mibi04g0645 775 Coils Coil 165 195 - -
Mibi04g0645 775 Gene3D - 317 511 IPR023393 -
Mibi04g0645 775 SMART START_1 280 514 IPR002913 GO:0008289
Mibi04g0645 775 ProSiteProfiles START domain profile. 271 517 IPR002913 GO:0008289
Mibi04g0645 775 CDD START_ArGLABRA2_like 275 513 - -
Mibi04g0645 775 ProSiteProfiles 'Homeobox' domain profile. 106 166 IPR001356 GO:0003677
Mibi04g0645 775 SUPERFAMILY Bet v1-like 274 514 - -
Mibi04g0645 775 Pfam Homeodomain 109 164 IPR001356 GO:0003677
Mibi04g0645 775 Pfam START domain 284 514 IPR002913 GO:0008289
Mibi04g0645 775 FunFam Homeobox-leucine zipper protein GLABRA 2 280 513 - -
Mibi04g0645 775 ProSitePatterns 'Homeobox' domain signature. 141 164 IPR017970 GO:0000981|GO:0006355
Mibi04g0645 775 SUPERFAMILY Homeodomain-like 97 167 IPR009057 -
Mibi04g0645 775 CDD homeodomain 113 164 IPR001356 GO:0003677
Mibi04g0645 775 Coils Coil 216 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0645 Mibi-ChrMibi04 12401703 12411205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0645 69 774 Homeobox Transcription Factor Family AT1G79840 64.895 0.0 928
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi04g0645 START 4.9e-55 CL0209