Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0628 ATGTATGTGTTGGGGAAAATTGCTTTATTCTTTGTTGAAAAGGAAAAAGTTAAGTTGGCAATGGAAAGGCCCAAGAAGATTCTCCTATTTGCTTCATCATATTTCTGGTATAATTTCACTTCATTTCTTGGTGCCATTTTGATGTCTAAACCATTAGAACATGATTACATAGGCTTAGCAGGAGCAGCATCAGAAAGTCCTTCCATGGAAAAGCACTCTAAGAAAATATCTTCTCCTTCTTCTGCTGCTTCCTCTACTCTTTCTTCTGAGAAGGAAAATAGCTCTTCTCTTAATTTCAAAGAGACAGAGCTAAGGCTTGGGCTTCCTGGTACTGATTCTCCTCCTCATCCTCCTTCTGAGAGGAAATCAGGAAGTGGGATTTCTCTTTTTGGCAAGGATTTGCAGAGTAATCATATTAATAATACTACTGAGAGCAATGCTAATAATGGGTTCTCTTCTGCTTCTTTGAAGAACAACATTGCTGGAGCCAAGAGGGGTTTTTCTGATGCCATTGATGGGATTGGGTCTTCTGGGAAATGGGGTTACTCTGTGATTGATAAAAAAAATGGGTCTGAAGCTGATTTGGGAAAAGGAGCTTCTTTGTTCTCTCCCAGAGGAGGGAATGTTGTGAAGCCTCCTCTTGTTTCTGCTGCTGTTGATGCTTCTGCAAATTCTGAACAAAAAATCATTAAAGATGGTGGAATGGTTCAAGAGAAGAAGAAACCTCAGGTTTCTGTTGCTGCTACAAATGAACATGGAAGTGCTCCTCCTGCTGCTAAGGCACAGGTTGTGGGATGGCCACCAATACGATCTTTTCGGAAGAACAGCATGGCCTCTAACTCGACGAAGAACAATGATGAAGGTGAAGGTAAAGCAGGATATGGCTGTCTCTATGTGAAGGTCAGCATGGATGGTGCCCCTTATCTCAGAAAGGTTGATCTCAAAACCTTCACCAATTATGTGGAACTTTCTTCAGCTCTTGAGAAGATGTTCAGCTGCTTTACCATTGGTCAATGCAAGTCTGGAGGACTTGCTGTGAAAGATGGCCTGACTGAGAGCTCTTTGAGGGATCTTCTCCATGGTTCTGAATATGTTCTTACTTATGAAGATAAAGATGGAGATTGGATGCTTGTTGGTGATGTTCCCTGGGAGATGTTCACTGACTCATGTAAGAGATTAAGGATCATGAAAGGTTCAGAGGCAATCGGTCTTGCTCCAAGGGTGGTGGAAAAATCCAGGAGCCAAAACTAA 1251 0.4197 MYVLGKIALFFVEKEKVKLAMERPKKILLFASSYFWYNFTSFLGAILMSKPLEHDYIGLAGAASESPSMEKHSKKISSPSSAASSTLSSEKENSSSLNFKETELRLGLPGTDSPPHPPSERKSGSGISLFGKDLQSNHINNTTESNANNGFSSASLKNNIAGAKRGFSDAIDGIGSSGKWGYSVIDKKNGSEADLGKGASLFSPRGGNVVKPPLVSAAVDASANSEQKIIKDGGMVQEKKKPQVSVAATNEHGSAPPAAKAQVVGWPPIRSFRKNSMASNSTKNNDEGEGKAGYGCLYVKVSMDGAPYLRKVDLKTFTNYVELSSALEKMFSCFTIGQCKSGGLAVKDGLTESSLRDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRLRIMKGSEAIGLAPRVVEKSRSQN 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0628 416 MobiDBLite consensus disorder prediction 73 101 - -
Mibi04g0628 416 Gene3D - 291 410 - -
Mibi04g0628 416 MobiDBLite consensus disorder prediction 68 130 - -
Mibi04g0628 416 Pfam AUX/IAA family 101 407 IPR033389 -
Mibi04g0628 416 FunFam Auxin-responsive protein 291 408 - -
Mibi04g0628 416 ProSiteProfiles PB1 domain profile. 296 398 IPR000270 GO:0005515
Mibi04g0628 416 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 96 403 IPR003311 GO:0005634|GO:0006355
Mibi04g0628 416 SUPERFAMILY CAD & PB1 domains 296 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0628 Mibi-ChrMibi04 12172291 12175072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0628 299 401 B3 DNA Binding Superfamily AT2G46530 33.981 4.24e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi04g0628 AUX_IAA 5.7e-91 CL0072