Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0621 ATGACGAATCAATCCCCCCCAGAAACAAAAACTACCAGTAATTCTCCTTCTTCTTCTTCGTCCTCATCTTCATCTTCTGAAATTCCAAACCCAATTTCCGATTCTGAGGCCCAAAAAACTCAATCTCAGAACAACCAAGAACAGAGCAAGAACAGAGCAAAGAGAAACAGAGTCTCTTCCAACAAGCACCCATCCTACCACGGAGTCCGAATGAGAAATTGGGGCAAATGGGTGTCCGAAATTCGAGAGCCTCGCAAGAAATCTCGAATCTGGCTCGGAACTTTCGCCACACCGGAAATGGCAGCTCGAGCCCATGACGTGGCTGCTCTTAGCATAAAAGGCGAATCAGCCCTCCTCAATTTCCCTCACATTTCATCCCTCCTTCCCAAACCTGTCACGCTCGACCCACGTGGCATACAAGCCGCCGCCACTGAAGCCGCAGCCATGGTCAAATTCGACACGCCGGAAGAAGAAGAAGAAGAAGAAACGGAGTCTTCTGAGCTGAGTGAGATAGTGGAATTGCCCAACATTGAAGAGAGTTTCGATTTGGTTGAGGAATCTTCATCGTCTTCTACTTCTTCGTTGAGGAATTATGATTTTGTGTGGGTGGAATCGATGGATTGTTGGGTTTATGATCCTCCATTAATGATGGGGTTGCAGAAAGATGGGATCTTTGACCAGTTTTATGGAGAAGAAGAAGAAAGCTTTGAGATTTCAATTTGGGATTAA 729 0.4609 MTNQSPPETKTTSNSPSSSSSSSSSSEIPNPISDSEAQKTQSQNNQEQSKNRAKRNRVSSNKHPSYHGVRMRNWGKWVSEIREPRKKSRIWLGTFATPEMAARAHDVAALSIKGESALLNFPHISSLLPKPVTLDPRGIQAAATEAAAMVKFDTPEEEEEEETESSELSEIVELPNIEESFDLVEESSSSSTSSLRNYDFVWVESMDCWVYDPPLMMGLQKDGIFDQFYGEEEESFEISIWD 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0621 242 MobiDBLite consensus disorder prediction 1 49 - -
Mibi04g0621 242 Gene3D AP2/ERF domain 65 124 IPR036955 GO:0003700|GO:0006355
Mibi04g0621 242 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Mibi04g0621 242 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Mibi04g0621 242 CDD AP2 64 123 IPR001471 GO:0003700|GO:0006355
Mibi04g0621 242 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Mibi04g0621 242 FunFam Ethylene-responsive transcription factor 2 64 123 - -
Mibi04g0621 242 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Mibi04g0621 242 MobiDBLite consensus disorder prediction 1 68 - -
Mibi04g0621 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 39 184 - -
Mibi04g0621 242 SUPERFAMILY DNA-binding domain 65 123 IPR016177 GO:0003677
Mibi04g0621 242 Coils Coil 37 57 - -
Mibi04g0621 242 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0621 Mibi-ChrMibi04 12052742 12053470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0621 28 214 AP2-EREBP Transcription Factor Family AT5G11590 49.758 2.77e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mibi04g0621 AP2 2.2e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0621 04 12052742 12053470 Mibi04g0621 04 12052742 12053470 ECH