Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0614 ATGTCCTGCAAGGATGGTAAAGGGATACTAGACAATGGCAAGTATGTCCGTTATACACCTGAGCAGGTTGAAGCTCTTGAGAGGCTTTACCATGATTGTCCCAAACCTAGTTCCATTCGTCGCCAGCAGCTTATCAGGGAGTGTCCTATTCTCTCTAACATTCAGTCCAAACAAATTAAAGTTTGGTTCCAGAATCGAAGGTGTAGAGAGAAGCAGAGAAAGGAGGCTATGCGCTTTCAAGCAGTTAATAGGAAGCTTACAGCTATGAACAAGCTCTTGATGGAGGAGAATGATAGGTTGCAGAAGCAGGTGTCTCATTTGGTGTTCGAAAATGGCTACTTTCGTCAAAACACTCAAAATACGACACTTGCAACTAAGGACGCAAGCTGTGAATCTGTGGTGAGCAGTGGTCAACACAGTTTGACAACACAGCATCCCCCAAGGGATGCAAGTCCTGCAGGACTTTTGTCCATTGCTGAAGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGGACTGCTGTTGAGTGGGTCCAGATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCACTGGCGTGGCAGCTCGAGCCTGTGGTCTAGTGGGTCTTGAACCCACAAGGGTTGTGGAAATTCTCAAAGATCGGCCTTCATGGTCTCGTGATTGCCGAGCTGTTGATGTTCTGAATGTGCTGCCCACTGCTAATGGTGGAACCATAGAGCTGCTTTATATGCAGCTATATGCGCCAACAACACTGGCGCCTGCTCGAGACTTTTGGCTGTTGCGTTATTCATCTATTTTGGAAGATGGCAGCCTAGTGGTCTGTGAGAGGTCTGTTAAAAATATCCAAAATGGTCCAAGCATGCCATCTATGCAGCATTTTGTGAGAGCAGATATGCTTCCTAGTGGGTACTTGATAAGACCTTGTGATGGGGGTGGTTCTATCATACACATTGTTGATCACATGGATTTGGAGCCATGGAGTGTGCCAGAAGTACTGCGTCCATTGTACGAATCATCAACAGTGATGGCTCAGAAGACAACCATGGCGGCCCTACGCCAGCTTAGACAGATATCTCATGAGGTTTCTCAGTCTAATGTCAATGGGTGGGGCAGACGACCTGCAGCTTTAAGAGCATTTAGCCAGAGACTGAGCAGGGGCTTCAATGAGGCTCTGAATGGTTTTACTGATGAAGGGTGGTCAATTATTGGCAATAATGGTGTGGATGATGTTATGATCCTGGTGAATTCTTCTCCTGAGAAATTAATGGGTTTAAATCTCCCTTTTGCCAATGGATTTCCATCTATTAGCAATGCAGTCTTATGTGCCAAAGCATCAATGTTGTTACAGAATGTGCCTCCGGCCATTCTCCTCAGGTTTTTGCGGGATCATAGATCAGAATGGGCAGACGACAACATGGATGCTTACTCGGCTGCTGCCATTAAAGTTGGTCATTGTAGCTTGCCTGGATCTCGTGTTGGAAACTATGGAGGTCAAGTTATACTTCCTCTGGCCCACACTATTGAACATGAAGAGCTTTTGGAAGTTATCAAATTGGATGGAATTGCTCATGCTGTTGAGGGCACACTAATGCCAAGAGAGCTGTTCCTTTTACAACTCTGTAGTGGGATGGATGAGAATGCTGTTGGCACCTGTGCTGAGCTTATATTTGCTCCAATTGATGCATCCTTTGCTGAATACACCCCCCTTTTACCTTCTGGATTTCGCATTATTCCTCTTGATTCTAGGAAGGAAGCCTCTAGCCCAAATCGAACCCTTGACCTTGCATCTTCTCTTGATGTTGGCCTTGCTGGGAATAGAGCATCTAATGACTATGCCGGAAATTCCGGCTGCATGAGATCTGTGATGACAATAGCATTTGAATTTGCATTTGAAAGTCATATGCAGGAGCATGTGGCGTCCATGGCACGGCAATATGTTCGCAGCATTATATCATCAGTCCAAAGGGTGGTGTTAGCTCTTTCTCCATCTCATCTGGGCTCGCTGGCTGGGCTTAGGCCATCGCTTAGTACTCCTGAAGCCGAAACACTTGCTCGATGGATCTGCAACAGTTATAGGTGCTACTTGGGAGTGGAGCTGTTAAAATCTAATAATGAGGGGACTGAATCGATACTCAAGGCCTTGTGGCATCACTCAGATGCTCTGTTGTGCTGCACGCTAAAGGCGGCGCCAGTGTTCACTTTTGCAAACCAGGCAGGGCTTGACATGCTGGAGACTACCTTAGTTGCACTGCAAGTCTTGAGTTTGGAGAAAATATTTGATGATCATGGGAGAAAGATCCTCTGTTCCGAGTTTCCCCAGATTATTCAACAGGGCTTTGCTTGCCTTCAAGGTGGTATCTGTCTCTCAAGCATGGGACGGCCAGTCTCACATGAGAGAGTTGTGGCCTGGAAAGTGCTGAATGAAGAGGAGAATGCTCATTGCATCTGCTTTATGTTCGTGAACTGGTCTTTTGTTTGA 2508 0.4625 MSCKDGKGILDNGKYVRYTPEQVEALERLYHDCPKPSSIRRQQLIRECPILSNIQSKQIKVWFQNRRCREKQRKEAMRFQAVNRKLTAMNKLLMEENDRLQKQVSHLVFENGYFRQNTQNTTLATKDASCESVVSSGQHSLTTQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLEPTRVVEILKDRPSWSRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYSSILEDGSLVVCERSVKNIQNGPSMPSMQHFVRADMLPSGYLIRPCDGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVMAQKTTMAALRQLRQISHEVSQSNVNGWGRRPAALRAFSQRLSRGFNEALNGFTDEGWSIIGNNGVDDVMILVNSSPEKLMGLNLPFANGFPSISNAVLCAKASMLLQNVPPAILLRFLRDHRSEWADDNMDAYSAAAIKVGHCSLPGSRVGNYGGQVILPLAHTIEHEELLEVIKLDGIAHAVEGTLMPRELFLLQLCSGMDENAVGTCAELIFAPIDASFAEYTPLLPSGFRIIPLDSRKEASSPNRTLDLASSLDVGLAGNRASNDYAGNSGCMRSVMTIAFEFAFESHMQEHVASMARQYVRSIISSVQRVVLALSPSHLGSLAGLRPSLSTPEAETLARWICNSYRCYLGVELLKSNNEGTESILKALWHHSDALLCCTLKAAPVFTFANQAGLDMLETTLVALQVLSLEKIFDDHGRKILCSEFPQIIQQGFACLQGGICLSSMGRPVSHERVVAWKVLNEEENAHCICFMFVNWSFV 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0614 835 CDD START_ArGLABRA2_like 152 367 - -
Mibi04g0614 835 Gene3D - 9 80 - -
Mibi04g0614 835 CDD homeodomain 14 74 IPR001356 GO:0003677
Mibi04g0614 835 Coils Coil 83 103 - -
Mibi04g0614 835 Pfam Homeodomain 14 72 IPR001356 GO:0003677
Mibi04g0614 835 Gene3D - 192 376 IPR023393 -
Mibi04g0614 835 CDD bZIP 66 105 - -
Mibi04g0614 835 SUPERFAMILY Bet v1-like 157 365 - -
Mibi04g0614 835 SMART HOX_1 11 77 IPR001356 GO:0003677
Mibi04g0614 835 SUPERFAMILY Homeodomain-like 13 78 IPR009057 -
Mibi04g0614 835 ProSiteProfiles 'Homeobox' domain profile. 17 73 IPR001356 GO:0003677
Mibi04g0614 835 SMART START_1 157 367 IPR002913 GO:0008289
Mibi04g0614 835 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 10 835 IPR044830 GO:0003700
Mibi04g0614 835 Pfam MEKHLA domain 692 834 IPR013978 -
Mibi04g0614 835 ProSiteProfiles START domain profile. 148 363 IPR002913 GO:0008289
Mibi04g0614 835 FunFam Homeobox-leucine zipper protein REVOLUTA 14 69 - -
Mibi04g0614 835 Pfam START domain 158 366 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0614 Mibi-ChrMibi04 11971957 11978757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0614 1 787 Homeobox Transcription Factor Family AT1G52150 82.405 0.0 1354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mibi04g0614 START 2.6e-53 CL0209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1281 11 30519803 30525077 Mibi04g0614 04 11971957 11978757 CCT
Mibi04g0614 04 11971957 11978757 Mibi04g0614 04 11971957 11978757 ECH