Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0605 ATGCCGGTACTGCGTAGTGGAGTGCGCAGGGGCCGGGCAGCAGCGAAAAGAGATAATCAGAATCAGAATCAGCAAAAACCTGATCCATTGATTGAGGAAGGGGAAGCAATTGCTACAAGAACAAGGGGGCGGCGTGCGGCGGCGGCTGTGGCGGCTGAGCCTAAGGCTAACAGGAAACAGAAGCAGGCGGCGGCTGCCGCGGCGGCCGATGAGCAGGCCAAGGCGAAGGATTTGAACGAAGCTGTTGGTGCTGGTGAAGCTGCTGGTGCTGGTGGTGGTGGTGGGGAGGAGAGAGAAGAGGTTGGAGAGAAGCAGATGGATGACTTCGATAGTGGTGGTGGCCGGAGTAATGATAAGGGTAATGCAGGTGAAGATGAGGGGAGCACTGCTCCCCTTCCTGAGAAGGTTCAAGTTGGCGGTTCCCCTATGTACAAAATTGATAGAAAACTGGGTAAGGGTGGATTTGGACAAGTATATGTTGGTCGACGAATTTCTGGTGTAAATATGAGTGAGAGGACTGGATCTGGGGCTGTAGAGGTTGCCCTTAAATTTGAGCATAGAAGTAGTAAAGGATGTAACTATGGACCTCCGTATGAGTGGCAAGTGTACAATAATCTTGGTGGAAGTCATGGTGTGCCAAAAGTACACTACAAGGGTAGGCAAGGTGACTATTATATCATGGTTATGGATATGTTGGGACCTAGCTTGTGGGATGTATGGAATAATAACTCTCATACGATGTCGACTGAAATGGTTGCTTGTATTGCCATAGAAGCAATATCTATATTGGAAAAGATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTTGGTCCTCCTGGGACTCCCGACGAAAAAAGGCTGTTTCTTGTTGATCTTGGATTAGCTACTAGATGGAAGGATAGTACAACGGGTATGCATGTGGATTATGACCAACGCCCAGATGTTTTCAGGGGTACAGTTCGCTATGCTAGTGTGCATGCACACTTGGGAAGAACTGGCAGCAGGAGGGATGATCTGGAATCACTTGCTTACACATTGATTTTCCTTCTTCGAGGTCGTCTCCCTTGGCAGGGGTATCAGGGAGAAAACAAAGGGTTTCTTGTTTGCAAGAAGAAGATGGGAACTTCTCCAGAGAGCCTATGTTGCTTCTGCCCTCAACCTTTTAGACAGTTTGTTGAACATGTAGTGAACCTGAAGTTTGATGAAGATCCTAACTATGCTAAATATATTTCTCTGTTCGATGGCATTGTTGGTCCAAATCCAGATATTAGGCCCATTAATACAGAAGGTGCACAAAAGCTTATTGGTCATAAGAGAGGTCGGTTGGCCATGGAAGAAGAGGATGATGAACAACCTAAAAAGAAGATCCGCATGGGTATGCCAGCAACACAATGGATAAGTGTTTACAATGCTCGCAGACCAATGAAACAAAGATATCATTACAATGTGGCAGATGCAAGGCTGTCCCAGCACATTGAGAAAGGAAATGAGGATGGGTTATATATTAGCAGCGTGGCTTCATGTCAGAACCTGTGGGCCCTAATCATGGATGCGGGAACTGGTTTTGTTGCTCAGGTTTATGAACTCTCTCCCTATTTTCTCCACAAGGAATGGATAATGGAACAGTGGGAAAATAATTTCTACATAAGTGCAATAGCTGGTGCTGCCAATGGGAGTTCGTTAGTGGTGATGTCTAAGGGCACAAATTTTGTACAGCAATCCTACAAAGTGAGTGATTCATTTCCATTTAAGTGGATAAATAAGAAATGGAGGGAGGGCTTTTATGTCACTGCAATGGCTACTGCAGGTAGCAGATGGGCAGTAGTTATGTCTCGTGGCGCAGGATTTTCTGATCAGGTGGTTGAACTAGATTTTCTTTATCCCAGTGAAGGGATTCACAAAAGATGGGATTACGGATACCGTATCACCGCAACAGCAGCAACTTGGGATCAAGCGGCATTCGTCCTCAGTGTGCCAAGGAGGAAACCTGCGGATGAAACACAGGAAACACTTAGAACTTCGTCTTTTCCTAGTGTACATGTCAAGGAGAAGTGGGCAAAGAATCTATATATTGCATCTATTTGCTATGGAAGAACAGTTTCTTGA 2127 0.4598 MPVLRSGVRRGRAAAKRDNQNQNQQKPDPLIEEGEAIATRTRGRRAAAAVAAEPKANRKQKQAAAAAAADEQAKAKDLNEAVGAGEAAGAGGGGGEEREEVGEKQMDDFDSGGGRSNDKGNAGEDEGSTAPLPEKVQVGGSPMYKIDRKLGKGGFGQVYVGRRISGVNMSERTGSGAVEVALKFEHRSSKGCNYGPPYEWQVYNNLGGSHGVPKVHYKGRQGDYYIMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKRLFLVDLGLATRWKDSTTGMHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPESLCCFCPQPFRQFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKIRMGMPATQWISVYNARRPMKQRYHYNVADARLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFVAQVYELSPYFLHKEWIMEQWENNFYISAIAGAANGSSLVVMSKGTNFVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAVVMSRGAGFSDQVVELDFLYPSEGIHKRWDYGYRITATAATWDQAAFVLSVPRRKPADETQETLRTSSFPSVHVKEKWAKNLYIASICYGRTVS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0605 708 PANTHER CASEIN KINASE-RELATED 138 671 - -
Mibi04g0605 708 Gene3D Transferase(Phosphotransferase) domain 1 115 467 - -
Mibi04g0605 708 ProSitePatterns Protein kinases ATP-binding region signature. 150 183 IPR017441 GO:0005524
Mibi04g0605 708 Pfam Protein kinase domain 144 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0605 708 CDD STKc_CK1 143 420 - -
Mibi04g0605 708 FunFam casein kinase 1-like protein HD16 117 464 - -
Mibi04g0605 708 MobiDBLite consensus disorder prediction 96 122 - -
Mibi04g0605 708 MobiDBLite consensus disorder prediction 1 140 - -
Mibi04g0605 708 SUPERFAMILY Protein kinase-like (PK-like) 144 424 IPR011009 -
Mibi04g0605 708 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Mibi04g0605 708 ProSiteProfiles Protein kinase domain profile. 144 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0605 708 SMART serkin_6 144 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0605 708 Coils Coil 61 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0605 Mibi-ChrMibi04 11775699 11780537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0605 239 420 MAP Kinase Kinase Kinase AT5G50180 26.316 8.16e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Mibi04g0605 Pkinase 3.7e-16 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0605 04 11775699 11780537 Mibi04g0605 04 11775699 11780537 ECH