Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0592 ATGGATGTGAGGTCAAGAAATGAGGAGATTTCTCCTCAGCTGCTAGATTTGATATCTAGGGATAATAGGAAAGAATGGCTTATGAATGACACAGAAGAAGAAGAAAGAAAGGACAAGTCTTGTTGTGAGGAGAGGAAACTTGAGCTCAGGCTTGGTCCACCTGGTGAAGAATGGGCTCATCATCATCATAATAATAACACCAAAAATAGTGATGAGTCTCTTCTCTCTCTTGGTTACTTCTCTTCTCAGCAAAGCCAGAAAATCTCTACCTCTCCATGGGCTTCTTCTTCTAAGCCTTCATCATTTCTTCAGTACCCTCAGAACATGCCAGAGAAGAAACCTTTCTCATCATCCTCTTCTGCTAATCCATCTGGTCCCTCTAATATCTCTCAGAAAAGAACTGCTCCTGGGCCAGTAGTGGGTTGGCCTCCAATTCGTTCATTTAGGAAGAACCTTGCAAGCAACAGCAATTCTAAGACTGCTCAGGAGACACAACAACATCAGCAGCAGCATGATGATGTTGCAGACAAGGTTGCTGGGAAGAAACCTGCTTGTGACAACGGTGTTGGTAAAGGTTTGTTTGTGAAGATCAATATGGATGGAGTTCCCATAGGGAGAAAAGTTGACCTTAATGCTTATGATAGCTATGAAAAACTCTCCTCTGCTGTTGATGAACTCTTCAGATGCCTCCTTGCTGCTCAAAGAGATTCCTGTGCTGGAGGAATCAAGAACAAGGCAGGAGAAAAAGAAAAAGCTATAACAGGTTTATTGGATGGAAGTGGAGAATATACTCTTGTTTATGAGGATAATGAAGGAGACAGGATGCTCGTTGGGGACGTGCCATGGCACATGTTTGTATCAACCGTGAAGAGGCTGCGTGTGTTGAAGAGTTCTGAGCTCTCTGCTTTTACCCTTGGTAACAAGCAACACAAGAAAACCACTTGA 945 0.4317 MDVRSRNEEISPQLLDLISRDNRKEWLMNDTEEEERKDKSCCEERKLELRLGPPGEEWAHHHHNNNTKNSDESLLSLGYFSSQQSQKISTSPWASSSKPSSFLQYPQNMPEKKPFSSSSSANPSGPSNISQKRTAPGPVVGWPPIRSFRKNLASNSNSKTAQETQQHQQQHDDVADKVAGKKPACDNGVGKGLFVKINMDGVPIGRKVDLNAYDSYEKLSSAVDELFRCLLAAQRDSCAGGIKNKAGEKEKAITGLLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLKSSELSAFTLGNKQHKKTT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0592 314 Pfam AUX/IAA family 47 302 IPR033389 -
Mibi04g0592 314 MobiDBLite consensus disorder prediction 149 168 - -
Mibi04g0592 314 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 44 300 IPR003311 GO:0005634|GO:0006355
Mibi04g0592 314 Gene3D - 188 309 - -
Mibi04g0592 314 FunFam Auxin-responsive protein 188 309 - -
Mibi04g0592 314 MobiDBLite consensus disorder prediction 53 68 - -
Mibi04g0592 314 MobiDBLite consensus disorder prediction 89 181 - -
Mibi04g0592 314 SUPERFAMILY CAD & PB1 domains 185 294 - -
Mibi04g0592 314 MobiDBLite consensus disorder prediction 53 72 - -
Mibi04g0592 314 MobiDBLite consensus disorder prediction 89 134 - -
Mibi04g0592 314 ProSiteProfiles PB1 domain profile. 192 297 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0592 Mibi-ChrMibi04 11570669 11573850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0592 196 308 B3 DNA Binding Superfamily AT4G23980 34.513 1.16e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Mibi04g0592 AUX_IAA 3e-74 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0592 04 11570669 11573850 Mibi04g0592 04 11570669 11573850 ECH