Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mibi04g0579 | ATGGCGACACCACCTCCGATGGGTTTGCCGGGAAACCCAATGTTCGACGGATCGGCGCCGCCGCCTCCGCCGCCGTCGCAAACTCCATGGACGGATATGACCGGAATATGCTTCCGGGATCAACTATGGCTCAACACTTACCCTCTCGATCGCAACCTAGTGTTCGATTATTTCGCATTATCCCCTTTCTATGACTGTACCTGCAACAATGAACAGCTTCGTATGCGCTCAATTCACCCCCTTGATCCCTCTCATTTGTCGAAAATGACAGGCATAGAGTATACGCTCAGTGAAGTGATGGAACCGCACCTTTTTGTTATTCGCAAGCAAAAGAGAGATGGCCCTGAGAAAGTTACGCCTATGCTAGCCTATTACATTTTGGATGGTTCAATATACCAAGCACCTCAGCTAGGAAATGTTTTTGCTGCACGAATTGGAAGGGCGCTATATCATATACAGAAGGCTTTTAGCACAGCTGCATCAAAGTTGGAGAAGATAGGATATGTTGATTCTGAAAATGAGGCTGCAGTACCAGAAGCAAAGGCTGGTAAAGAGACAATTGACATAAAGGAAGTTATGCGGGTGGATCACATTCTTGCATCCCTACAGCGTAAGCTACCTCCAGCTCCACCTCCACCACCATTTCCTGAAGGCTACATTCCACCTCCAACTGCAGAAACTGAGAAAGGACCCGAAGGTCAAGAAGCAGTAGAGTCACAAGCTCCTCAAATCGATCCTATAATTGATCAAGGACCTGCAAAGAGGATGAAAGTTTGA | 777 | 0.4736 | MATPPPMGLPGNPMFDGSAPPPPPPSQTPWTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDCTCNNEQLRMRSIHPLDPSHLSKMTGIEYTLSEVMEPHLFVIRKQKRDGPEKVTPMLAYYILDGSIYQAPQLGNVFAARIGRALYHIQKAFSTAASKLEKIGYVDSENEAAVPEAKAGKETIDIKEVMRVDHILASLQRKLPPAPPPPPFPEGYIPPPTAETEKGPEGQEAVESQAPQIDPIIDQGPAKRMKV | 258 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mibi04g0579 | 258 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Mibi04g0579 | 258 | Gene3D | Mediator complex, subunit Med6 | 30 | 159 | IPR038566 | - | |
Mibi04g0579 | 258 | PANTHER | MED-6-RELATED | 16 | 257 | IPR007018 | GO:0003712|GO:0006357|GO:0016592 | |
Mibi04g0579 | 258 | MobiDBLite | consensus disorder prediction | 204 | 258 | - | - | |
Mibi04g0579 | 258 | Pfam | MED6 mediator sub complex component | 36 | 161 | IPR007018 | GO:0003712|GO:0006357|GO:0016592 | |
Mibi04g0579 | 258 | PIRSF | MED6_meta/plant | 22 | 258 | IPR016820 | GO:0003712|GO:0006357|GO:0016592 | |
Mibi04g0579 | 258 | MobiDBLite | consensus disorder prediction | 205 | 221 | - | - | |
Mibi04g0579 | 258 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Mibi04g0579 | 258 | FunFam | Mediator of RNA polymerase II transcription subunit 6 | 30 | 159 | - | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | MED6 | Mibi04g0579 | Med6 | 1.9e-41 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mibi04g0579 | 04 | 11333301 | 11336295 | Mibi04g0579 | 04 | 11333301 | 11336295 | ECH |