Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0575 ATGGGAATGTCAAAATTCTTCTCTTCTCTCGTTGGTTGTCTGGCTTTTGCAGTTCTTGTTCAATCTCAGGATCAATCAGGTTTCACAAGCATAGATTATCCATGTAGCCCTATAGCCTACATTTGGGAAGGTCTAAATTGTGTTTATAATGGCCAGAATCCCCCAAGAATCACAGAACTAAATTTATCTTCAAGTGGATTGACAGGACAGATAGATTCTTCCATCTCAAATCTAACCATGTTGGAGAAGTTGGATTTATCAAATAATAGCTTAAATGGACCAGTCCCAAATTTTCTTTCTCAACTACATAATCTGAAGATCTTAAACCTTCAGAACAACAACTTCTCAGGCGTTGTTCCATCTGATCTGGTTGAAAAATCAAACCAAGGTTCCCTCTTACTGAGTGTTGGACAAAATACATATCTATGTGAATCTCCTTCATGCAACAACAAGAAAAAGAAGAAGATTATTGTTCCCATAGTAGCATCAGTTGGTGGAGTTCTGATCCTCATCGTAGCTGCAGCAACTTTATTTGTTACCCTAAAAAGGAGAAAACCAAGAGGAACAACTCAAGGTTATCAGCAATTTCAAGCAGAGGTTAAACTTTTAATGAGAGTTCATCACAGAAATCTGACTTCCCTCATTGGGTATTGCAATGAAGAAGTCAATAAGGGGCTCATATATGAATATATGGCTAATGGTAACCTACAAGATTACCCTTCAGGAAATGACAACATATTAAAGTTCCCGACTTGGCGGGACAGACTCAGTATAGCACTGGATGCAGCACTAGGATTGGAGTATCTGCATAATGGATCCAGGCCACCTATAATTCATAGAGATGTAAAATCTTCAAACATCTTGCTGAATGAAAACTTCAGAGCCAAAATATCCGACTTTGGTTTATCTAAAACTATCCCACTTGATGGTGGAACTCATGTGTCAACTGTTGTTGCTGGCACTCCTGGTTATCTAGACCCTGAACACTTAGGCAGAGAAACTCCTAAAAGCTCCCCATTGAGTGGTGATTCTCTTGCATACTTTCCAAGTGACTCTGAGGCCTCAAACTTCTCAGAGCCTGACTATGGCTATGCCAGCGAACTTTTGCCTTCTTGGTGGCCGGCATCTAGACCCCGAGCTAATCTAGCTGGTGTTTCTGGTCTAGGAGTGAAGCAGCAGCAAAGGAATTCATTGAGTGATAAACTTGATGATGACCAAGATCTCTTATCTTCAGAGCTTGAAATGATGAAGGAGAGATTTTCAAAGCTTTTGCTTGGGGAAGACATGTCTGGTAGTGGGAAAGGTGTCTGCACTGCAGTAATCATCTCAAATTCCATCACAAACCTTTATGTTCTCCTATGGATTCTCAAATCCATTAATCCCACCCAGTCGTATATTTTCGCCATCAATGAACAACCACCTTCAGGGCTAACTATGAGATGCTTCTTCGAATTGTAA 1458 0.4033 MGMSKFFSSLVGCLAFAVLVQSQDQSGFTSIDYPCSPIAYIWEGLNCVYNGQNPPRITELNLSSSGLTGQIDSSISNLTMLEKLDLSNNSLNGPVPNFLSQLHNLKILNLQNNNFSGVVPSDLVEKSNQGSLLLSVGQNTYLCESPSCNNKKKKKIIVPIVASVGGVLILIVAAATLFVTLKRRKPRGTTQGYQQFQAEVKLLMRVHHRNLTSLIGYCNEEVNKGLIYEYMANGNLQDYPSGNDNILKFPTWRDRLSIALDAALGLEYLHNGSRPPIIHRDVKSSNILLNENFRAKISDFGLSKTIPLDGGTHVSTVVAGTPGYLDPEHLGRETPKSSPLSGDSLAYFPSDSEASNFSEPDYGYASELLPSWWPASRPRANLAGVSGLGVKQQQRNSLSDKLDDDQDLLSSELEMMKERFSKLLLGEDMSGSGKGVCTAVIISNSITNLYVLLWILKSINPTQSYIFAINEQPPSGLTMRCFFEL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0575 485 Gene3D PRONE domain, subdomain 1 404 466 - -
Mibi04g0575 485 FunFam Leucine-rich repeat receptor-like kinase 23 144 - -
Mibi04g0575 485 Gene3D Transferase(Phosphotransferase) domain 1 232 342 - -
Mibi04g0575 485 Pfam Leucine rich repeat 55 115 IPR001611 GO:0005515
Mibi04g0575 485 SMART serkin_6 154 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0575 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 277 289 IPR008271 GO:0004672|GO:0006468
Mibi04g0575 485 Coils Coil 485 485 - -
Mibi04g0575 485 ProSiteProfiles PRONE domain profile. 403 485 IPR005512 GO:0005085
Mibi04g0575 485 PANTHER OS07G0107800 PROTEIN-RELATED 33 330 - -
Mibi04g0575 485 SUPERFAMILY Protein kinase-like (PK-like) 177 333 IPR011009 -
Mibi04g0575 485 Gene3D Ribonuclease Inhibitor 18 133 IPR032675 -
Mibi04g0575 485 ProSiteProfiles Protein kinase domain profile. 154 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0575 485 Pfam Protein kinase domain 174 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0575 485 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 411 451 IPR005512 GO:0005085
Mibi04g0575 485 SUPERFAMILY L domain-like 42 140 - -
Mibi04g0575 485 Gene3D Phosphorylase Kinase; domain 1 171 231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0575 Mibi-ChrMibi04 11253592 11261099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0575 34 329 Receptor kinase-like Gene Family AT2G19230 47.863 1.26e-99 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Mibi04g0575 Pkinase 1.5e-25 CL0016