Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0570 ATGGAGGGTCTAAGTTGGAATTCCTCGCAAGCTGTGGAGAATCTACACATATTGTGGAGCAATATAGAACAACAAGAACTTGAAGCAAGCTTGAATCCAAGCTTTCCTAATAATCCAATGCAAGAGATGCAGAATCATCATCTATATGCAAATTCTGGAGGAAAAGGATTGATGAAAGAGATGGTTCAATTATCAGAAGCTGAAGCAGAATTAGTAGGAGCTAATACTAGCAGTTCAAAGACAAATCTGTCACAGCTAGCAGGTGGGTCCAGCTGGGTTGGTGGATCTTATAGTATGAATAACCCATTTGGTAATTTTTTTGATCCTTCTCCAGAATTTAACATGGCCCACCAACAATATCCACCACAACCTCTTGTCAATAATAATGGCTCACAAAATGGTACCTCCACCTTCTCTGCTGAGTCACTAGATTGCTTGTTCTCTGCTACAAATAGCAACACAGACACATCTGTTGAGGAAGATGATGGAGTCTCCATGATCTTACCAACTGATTGCAGCAGAAGAAGATCATCAAACTTATGGAGCTTTAGTTATAACAACAATGGAGGAAGTGAATCTGATCAGAGTACCACCAACAATAATGCTACCAATAATTCTGATCATAATGAAACATTATCTCAGGGTTCCTCAGATCTTCATGCAAACCAAGTAGGGATAAAAATTGCAGAATCCACCAAGACTACTAATAATAAGTGTTCCAAAAGGAGAATTCTTGATGATGGTGCCTTTGACCAATATCCATACTTCAGCATTGAAGAAGGTGGTGGTGGTGGTTCAAGTTCATTCAGAATCATTGAGGAGAAGAACAAGAACAATGATAATAACCTGCCGAATCCAAAAAGATCCAGATGGGATTCTAAGCTTCCAACTTCTTCAAACATCAATTTCAAGCAGCCCCATTCATCATCATCAACAACAACAACATCTTCCACCATGGAAGAACCAGACCCTGATGCCATAGCACAAATGAAGGAGATGATATACAGGGCAGCAGCATTTAGGCCTGTGAATTTAGGGATGGAGGTGGTGGAGAAGCCAAAGAGGAAGAATGTGAAGATATCATCAGATCCTCAAACTGTGGCTGCAAGGCTGAGAAGGGAGAGAATAAGTGAAAGAATTAGGGTTTTGCAGAAACTGGTTCCTGGTGGAAGCAAGATGGATACTGCTTCAATGCTTGATGAAGCTGCAAATTACCTCAAGTTTCTAAGGTCACAAGTGAAAGCACTAGAGAGTCTAGGAAGCAAAGTTGAGGCTATGAATAACTGTCCTCCCACAAATATTGCCTTCTCTTTGAACCCTTCTTTTCCCATGCAGTTTAACCCTAATAGTTTCCACCACATCCAACACTGA 1371 0.4063 MEGLSWNSSQAVENLHILWSNIEQQELEASLNPSFPNNPMQEMQNHHLYANSGGKGLMKEMVQLSEAEAELVGANTSSSKTNLSQLAGGSSWVGGSYSMNNPFGNFFDPSPEFNMAHQQYPPQPLVNNNGSQNGTSTFSAESLDCLFSATNSNTDTSVEEDDGVSMILPTDCSRRRSSNLWSFSYNNNGGSESDQSTTNNNATNNSDHNETLSQGSSDLHANQVGIKIAESTKTTNNKCSKRRILDDGAFDQYPYFSIEEGGGGGSSSFRIIEEKNKNNDNNLPNPKRSRWDSKLPTSSNINFKQPHSSSSTTTTSSTMEEPDPDAIAQMKEMIYRAAAFRPVNLGMEVVEKPKRKNVKISSDPQTVAARLRRERISERIRVLQKLVPGGSKMDTASMLDEAANYLKFLRSQVKALESLGSKVEAMNNCPPTNIAFSLNPSFPMQFNPNSFHHIQH 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0570 456 MobiDBLite consensus disorder prediction 282 322 - -
Mibi04g0570 456 Pfam Helix-loop-helix DNA-binding domain 370 409 IPR011598 GO:0046983
Mibi04g0570 456 Gene3D - 365 429 IPR036638 GO:0046983
Mibi04g0570 456 MobiDBLite consensus disorder prediction 276 322 - -
Mibi04g0570 456 SMART finulus 366 415 IPR011598 GO:0046983
Mibi04g0570 456 MobiDBLite consensus disorder prediction 186 218 - -
Mibi04g0570 456 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 360 409 IPR011598 GO:0046983
Mibi04g0570 456 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 150 444 IPR045843 GO:0003700|GO:0006355
Mibi04g0570 456 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 366 425 IPR036638 GO:0046983
Mibi04g0570 456 Coils Coil 399 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0570 Mibi-ChrMibi04 11030774 11032144 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0570 133 453 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 46.667 1.65e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi04g0570 HLH 4.7e-05 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1327 11 32126601 32127518 Mibi04g0570 04 11030774 11032144 CCT
Mibi04g0570 04 11030774 11032144 Mibi04g0570 04 11030774 11032144 ECH