Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0565 ATGACCACAGTACCAGGGCAGCTCGTGTGGGAAATCGTGAAGAAGAATAACTGTTTTTTGGTGAAGGAATTTGGTAGGGGGACTCAGAGTGTGCAGTTTAGTAAAGAAAGCAACAATCTTTACAACCTTAACTCTTTCAAGTACTCTGGTTTGGCAAACAAGAAAACTGTTACCATTCAGCCTGCTGGCAAAGATCAATCTGTGCTGCTGGCAACGACCAAGACAAAGAAGCAGAACAAACCGGCTGCATTGCATCACAAGTCTGTCATGAAAAAGGAATTCAGAATGATGGCAAAGGCAATAGAGAACCAGGTGGCAGATAACTACTACAGGCCTGACCTTAAGAAGGCAGCTCTAGCAAGGTTGAGTGCCATTCATAGGAGCCTGAAAGTTGCCAAGTCTGGTGTTAAAAAGAAGAACAGACAGGCCGTGAAGATTTCTGGCAGGAAGTGA 453 0.4459 MTTVPGQLVWEIVKKNNCFLVKEFGRGTQSVQFSKESNNLYNLNSFKYSGLANKKTVTIQPAGKDQSVLLATTKTKKQNKPAALHHKSVMKKEFRMMAKAIENQVADNYYRPDLKKAALARLSAIHRSLKVAKSGVKKKNRQAVKISGRK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0565 150 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
Mibi04g0565 150 Gene3D - 6 133 - -
Mibi04g0565 150 FunFam 60S ribosomal protein L28 5 133 - -
Mibi04g0565 150 PANTHER 60S RIBOSOMAL PROTEIN L28 1 150 IPR002672 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0565 Mibi-ChrMibi04 10957577 10959591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0565 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 74.126 3.52e-77 224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1336 11 32207305 32211521 Mibi04g0565 04 10957577 10959591 CCT
Mibi04g0565 04 10957577 10959591 Mibi11g1336 11 32207305 32211521 ECH
Mibi04g0565 04 10957577 10959591 Mibi04g0565 04 10957577 10959591 ECH