Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0552 ATGTCATCTCTCTGCAACTACCATATCATAACCAGTCTTTTTGCTTGCTTTTGGGGAATATTGGCGCTCATGAATCGGGAACAGAAGCGAGGGAAGGTAGAGAAAGATTCTGATAATGCTGAGAAGGTCATTGTTGCCGTTAAGGCATCGAAGGAAATCCCCAAGACTGCTCTTGTCTGGTCTCTAACTCATGTTGTTCAACCTGGGGATTGCATTATTTTGTTAGTGGTTTTGCCTCCACAAAGCTCAGGTAGAAGATTATGGGTGTTTCCAAGATTTGCTGGTGATTGCGCCAACAGTAACAAGAAGTCTCCTACAGGAACAACTTCAGAGAAGAAGTGTGAGATTAATGATTCTTGTTCCCAAATGATCCTTCGGCTTCACGATGTTTATGATGCAAACAAGATAAATGTCAAGATTCAAATTGTATCTGGATCTCCGGTTGGAGGAGTAGCTGCAGAGGCCAAGAAAGCCCAGGCCAATTGGGTTATCTTAGACAAAGATCTCAAACATGAGGAAAAACGCTGCATGGAAGAATTGCAATGCAACATTGTGGCTATGAAGCGATCTCAACCGAAAGTTCTCCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAGCCAGTACATTGCCTTCTGATAAAGAAATGCCCGGAAAACTAACCAAACAGAAGAACGAATCTTTAAACTCCATAAAAGGACCTGCTGTCACCCCAACTAGCAGCCCCGAGCAAGAGACACCATTTACTGCAACTGAAGCTGGTACCTCATCAGTTTCAAGCTCGGATCCTGGGACCTCACCATTTTTTGTCTCGGAGATCAATGGTGAGTTAAGGAAAGAGGAGACAATTAAGGAAATTGAAGAACTTGATGATACTAATTCAGACACGGACAGTGAAAATATGTCCACATCCTCAGCAAGCTTGAGATTCCAGCCTTGGATCTCAGAAATGCTTCTACATCAGCGATCATCTCTATGTGCAGATGAAAGATCTGAGAGATCTCATAACAAACCTCAAACATCTACAACCAGAGCCTTGCTTGAAAAGCTCCAGAGGCTTGAGAGAGATTCTGGATTTGAGATTTCAACCTATAGAAGTGACTTGGATTTCAGTGGAAATGTAAGAGATGCTATAGCATTATCTAGAAACGCTCCTCCTGGTCCACCTCCGTTATGTTCTATATGTCAACACAAAGCACCAGTTTTCGGAAAACCTCCAAGGTGGTTCAGCTATGCTGAGTTGGAGCTTGCTACTGGGGGATTTTCTCAAGCCAATTTCTTGGCAGAAGGAGGATTTGGGTCTGTTCACAGAGGGATTCTATCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGCTCTCAGGGTGATCATGAGTTTTGCTCAGAAGTAGAAGTCTTAAGCTGTGCTCAGCATCGAAATGTTGTTATGCTGATTGGGTTTTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCACTGGATTCTCATTTATATGGGAGACAACGGGATGTACTGGAGTGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGCTGCGGTATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGGGACATGCGCCCAAACAATATTCTCATCACCCATGATTTTGAACCACTGGTTGGAGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACTGAAGTGGAAACTAGAGTCATTGGGACGTTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAGGCTGATGTTTATTCTTTTGGAGTGGTATTAGTGGAGCTCATAACTGGGCGAAAAGCTGTGGATCTCAGTCGACCTAAAGGGCAGCAGTGTCTTACTGAATGGGCGCGACCATTGTTAAAGGAATGTGCCATTGATGAATTGATTGATCCAAGGCTAGGAAATTGTTATTCGGAAAATGAGGTCAATTGTATGCTTCATGCTGCCTCATTATGCATACGGCGAGATCCTCATTCTAGACCTCGCATGTCACAGGTTCTCCGAATACTCGAGGGCGACATGGTCATGGAGACAAATTACCTAACTGCTGGTTATGATGCTGGGAACAGGAGTGGTCGGATTTGGGCAGAGCAGCAGATGCAGCATCATTACAGTGGTCCCCTGCTGGAAGAACCCCTGGAATCTTCATTCAGTGGAAAGCTTTCTCTGGAGAAATACAGGTCTGCATATTGGGAAAGGGACAAAGCCTAA 2283 0.4424 MSSLCNYHIITSLFACFWGILALMNREQKRGKVEKDSDNAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCIILLVVLPPQSSGRRLWVFPRFAGDCANSNKKSPTGTTSEKKCEINDSCSQMILRLHDVYDANKINVKIQIVSGSPVGGVAAEAKKAQANWVILDKDLKHEEKRCMEELQCNIVAMKRSQPKVLRLNLVGSQKKDLEEASTLPSDKEMPGKLTKQKNESLNSIKGPAVTPTSSPEQETPFTATEAGTSSVSSSDPGTSPFFVSEINGELRKEETIKEIEELDDTNSDTDSENMSTSSASLRFQPWISEMLLHQRSSLCADERSERSHNKPQTSTTRALLEKLQRLERDSGFEISTYRSDLDFSGNVRDAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGILSDGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDVLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTEVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELITGRKAVDLSRPKGQQCLTEWARPLLKECAIDELIDPRLGNCYSENEVNCMLHAASLCIRRDPHSRPRMSQVLRILEGDMVMETNYLTAGYDAGNRSGRIWAEQQMQHHYSGPLLEEPLESSFSGKLSLEKYRSAYWERDKA 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0552 760 ProSitePatterns Tyrosine protein kinases specific active-site signature. 545 557 IPR008266 GO:0004672|GO:0006468
Mibi04g0552 760 FunFam Dual-specific kinase DSK1-like 34 188 - -
Mibi04g0552 760 MobiDBLite consensus disorder prediction 289 308 - -
Mibi04g0552 760 Pfam Protein kinase domain 428 691 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0552 760 Gene3D Phosphorylase Kinase; domain 1 396 499 - -
Mibi04g0552 760 MobiDBLite consensus disorder prediction 209 224 - -
Mibi04g0552 760 PANTHER OS01G0750732 PROTEIN 184 702 - -
Mibi04g0552 760 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 500 703 - -
Mibi04g0552 760 Coils Coil 282 302 - -
Mibi04g0552 760 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 396 499 - -
Mibi04g0552 760 CDD STKc_IRAK 430 696 - -
Mibi04g0552 760 Gene3D Transferase(Phosphotransferase) domain 1 500 707 - -
Mibi04g0552 760 ProSiteProfiles Protein kinase domain profile. 424 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0552 760 MobiDBLite consensus disorder prediction 225 271 - -
Mibi04g0552 760 SUPERFAMILY Protein kinase-like (PK-like) 408 700 IPR011009 -
Mibi04g0552 760 MobiDBLite consensus disorder prediction 205 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0552 Mibi-ChrMibi04 10774814 10780505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0552 411 724 Trihelix Transcription Factor Family AT5G38560 50.305 6.04e-104 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Mibi04g0552 Pkinase 1.8e-41 CL0016