Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0551 ATGGAGACAAAACTTGAACTCCTCCATGGCACAATTGAAGCCACCATCTTCAATGCTACTCCTTATGCACCTGCATTTCCCTTCAATTGTATCCATGCAAAAGGGAAACCTGCATATGTGAGCATCAAGCTAGGCAACAAGAAGGTAGCAAGGACGAGTCAAGAACGAGGTCGTGTGTGGAATCAAACTTTTCAGATTCCATGTGCTCACCCAGCAGATTCAATTATCATCATCACATTGAAAACCTCATGCTCCATACTGGGGAGATTCCATATTCAGGCTCATAAGCTACTGAAGGAAGACAGTTTAATTAATGGTTTCTTCCCTCTCCACATGGAAAATGGAAAACCAAATCCTGAACTCAAGTTAAGGTTTTTATTATGGTTCAAACCAGCAGGGCTTGAGCCAAGTTGGGAGAAGCTGCTCAGGAATGGGGAGTTTCATGGCTTAAGGGACGCCTCATTTCCACAAAGGTCCAATTGTCAGGTCAAGCTTTATCACGATGCTCACCATTCTTTCACTTATCAACCTCCTTTTGATCATTGTGGAGCTCCAAGAAGGCTATGGGACGATGTGTATAAAGCTATTGAGGGTGCAAAGTACTTGGTTTATATTGCTGGATGGTCCTTCAATCCTAAGATGGTTCTGGTCAGAGATACAGAAACGGAAATCCCACATGCGAGAGGAGTAAAGCTTGGTGAGCTGTTAAAAAAGAAGGCAGAGGAAGGAGTAGCAGTGAGGGTGATGGTTTGGGATGATGAAACATCTTTGCCATTTATAAAGAACAAGGGTATGATGAATACACATGATGAGGATGCTTTTGCATTTTTCAAACATACAAAAGTCATATGCAGAAAGTGTCCCAGATTACACCACAAGTTCCCCACATTGTTTACCCACCATCAGAAGACTATAACTGTTGATGCCAAAGCACCGAAATCTGTGAATAATAGAGAAATTATAAGCTTTATTGGTGGGTTAGATCTATGTGATGGCAGGTATGACACAGAGATGCATTCATTGTTTAAAACACTAAATAGCGAATCCCATTGCAATGATTTCTATCAGACAAATATTGCAGGAGCTAACCTTAATAAAGGAGGGCCAAGGGTGCCTTGGCATGATGCTCATGCTTGTGTTATAGGTGGTGCTGCTTGGGACGTGTTAACAAACTTTGAACAAAGATGGACAAAGCAGTGTGATCCTTCCCTTTTAGTCCCTGCAAGTGCCATAGCAACCCTCATGCCCCAAACGTTTTCAAGCATTCCTACTGAGAGGAATTGGAAAGTTCAAGTATATAGATCAATTGACCATCTCTCTGCTTACCAATTGTTTAGTAAGTTTACTGTGGAGAGGAGCATCCATGATGCTTATGTTGAAGCAATCAGGCGTGCTGATAGGTTCATATACATTGAAAACCAGTATTTCATTGGGGGATGTCAATTGTGGGACAAAGACAAGCATAGTGGATGCAGGAATTTGATTCCCATTGAGATAGCACTCAAGGTGGTGAGTAAGATTAAGGCAAAGGAGAGGTTTGCAGTGTATGTAGTGATTCCAATGTGGCCAGAAGGAATACCTGAAAGTGAATCAGTTCAGGACATTCTGCATTGGACAAGAGAAACAATTTCAATGATGTATAGATTGATTGGAGAAGCAATACAAGAGAGTGGGGAAGCAGGGCACCCAAGAGACTACTTGAATTTTTTTTGCCTGGCAAATAGGGAACAGAAGGGGGAAGGGGAATACATGCCACCACATTCTCCTCACCCTGAAACACAATATTGGAATGCCCAAAAGAGTAGAAGGTTCATGGTGTATGTCCACTCCAAGCTCATGATAGTGGACGACATGTACATGTTGATAGGATCAGCCAACGTGAACCAGAGATCAATGGATGGACAAAGAGACACAGAGATAGCTATAGGATGCTACCAAACACAAGACACAGATTCCAACAACGAAGCAATGAATCGTGGGGAGATTCACGCATACAGGATGTCACTGTGGTATGAGCACAGTAGGTGTGAAGAAGAAGGGTTGATGTTGGAGCCAGAGAGTTTGGAATGCGTTAGGAAAATGAGATCAATAGGAGATAGAATGTGGGAAGTGTACAGAGGAGAAGAAGTTGTGGACATGGAAAGCATTCATCTTGTGAGCTACCCATTGAAGGTGAAGGAGGAAGGTGTAGTGGAAGATGTGAATGAGTGTGGAGGTTGTTTTCCTGATACAGAGTGTCCTGTGAAGGGGAAGAGATCCAAGGTGTTGCCTCCTATATCCACTACATAG 2289 0.4273 METKLELLHGTIEATIFNATPYAPAFPFNCIHAKGKPAYVSIKLGNKKVARTSQERGRVWNQTFQIPCAHPADSIIIITLKTSCSILGRFHIQAHKLLKEDSLINGFFPLHMENGKPNPELKLRFLLWFKPAGLEPSWEKLLRNGEFHGLRDASFPQRSNCQVKLYHDAHHSFTYQPPFDHCGAPRRLWDDVYKAIEGAKYLVYIAGWSFNPKMVLVRDTETEIPHARGVKLGELLKKKAEEGVAVRVMVWDDETSLPFIKNKGMMNTHDEDAFAFFKHTKVICRKCPRLHHKFPTLFTHHQKTITVDAKAPKSVNNREIISFIGGLDLCDGRYDTEMHSLFKTLNSESHCNDFYQTNIAGANLNKGGPRVPWHDAHACVIGGAAWDVLTNFEQRWTKQCDPSLLVPASAIATLMPQTFSSIPTERNWKVQVYRSIDHLSAYQLFSKFTVERSIHDAYVEAIRRADRFIYIENQYFIGGCQLWDKDKHSGCRNLIPIEIALKVVSKIKAKERFAVYVVIPMWPEGIPESESVQDILHWTRETISMMYRLIGEAIQESGEAGHPRDYLNFFCLANREQKGEGEYMPPHSPHPETQYWNAQKSRRFMVYVHSKLMIVDDMYMLIGSANVNQRSMDGQRDTEIAIGCYQTQDTDSNNEAMNRGEIHAYRMSLWYEHSRCEEEGLMLEPESLECVRKMRSIGDRMWEVYRGEEVVDMESIHLVSYPLKVKEEGVVEDVNECGGCFPDTECPVKGKRSKVLPPISTT 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0551 762 CDD PLDc_pPLD_like_2 449 650 - -
Mibi04g0551 762 Pfam Phospholipase D C terminal 682 751 IPR024632 -
Mibi04g0551 762 Gene3D Endonuclease Chain A 443 651 - -
Mibi04g0551 762 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Mibi04g0551 762 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
Mibi04g0551 762 PANTHER PHOSPHOLIPASE D 4 744 IPR015679 -
Mibi04g0551 762 Pfam PLD-like domain 606 642 IPR025202 -
Mibi04g0551 762 Gene3D Endonuclease Chain A 169 424 - -
Mibi04g0551 762 SUPERFAMILY Phospholipase D/nuclease 142 406 - -
Mibi04g0551 762 SUPERFAMILY Phospholipase D/nuclease 422 673 - -
Mibi04g0551 762 SMART pld_4 604 631 IPR001736 GO:0003824
Mibi04g0551 762 SMART pld_4 296 333 IPR001736 GO:0003824
Mibi04g0551 762 Pfam C2 domain 38 110 IPR000008 -
Mibi04g0551 762 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Mibi04g0551 762 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 125 IPR035892 -
Mibi04g0551 762 PIRSF PLD_plant 2 762 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0551 Mibi-ChrMibi04 10763647 10767546 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0551 30 762 Phospholipase D Gene Family (Wang group) AT1G55180 62.853 0.0 971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0551 04 10763647 10767546 Mibi04g0551 04 10763647 10767546 ECH