Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0535 ATGTTGTCTCTGCTTTCACTCACTTACTTTTTCAATTCTGGGCAGAGCTGCAGAATTGATCAGCAGAAAATGGCTCTGGGGCTGTTGTTTTTCCTGATAATTAAGCTGCATTTGGTTGTCGGTGCCACACATTTTCATGGATATGAAGCAACCAAACAACGCCATTCCAGAAGCCACACAAGTATAGCTCTTCCACCATCCAAATCGTCTTATGGAGTTCCTGCTAGTATTGCAGTTCCACCTTCTAAGTCATTAGCTAAGGCTCCTATAAAGGAACGGACCCATGGTTTAATAGGTTCTCCAATATTTCATCAAGGGCATCATCATTATTCCAGAAGAAAGTCCAGTGAACCAGCAGCACCAGAGCCAACTTATGCAGTTCATCCTCCCACATACAGTCATCAAGGTATAGCTCCTTCTGTCTTCCAACCACAACCTCCTTTCTCTTCTCCATCAGGGTGGAAATTACCTGCACCTGCTCCATCACCAGCAGTTCTATCAATCCCCCTGAATGTGCCCTCTCCTTCACCTGGAATTACACCTCAGGGTTCACCATGGAGGAAGATGAAGGCTCCACCAACAAAACCTGTTTTGAGTCTGCCACCTCCACCTCCTAATAAGGACTGTTTATGGGTGTCTTGCTCAGAACCCTTTACATATGCACCTCCTGGATCACCTTGTGGTTGTGTGTGGCCACTTAAAGTTAAGCTTCGCCTCAGTGTTTCAATATACAAGTTCTTTCCGTTGGTATCAAAGCTGGCAGAGGAAATTGCTGCCAGTGTTTCACTGAATCATAACCAGGTTCGTATCGTGGGAGCCGATGAAGCTGGTCAGCAACTGGAGAAAACTATTGTTCTCATAAACTTGGTACCCACAGGATCAAGATTTGATGATGCAATGGCATTTTCAATATATAAGAAATTTTGGCACCAGGAGGTCCACACAGATGCTTCCCTTTTTGGTGCTTGTGAAGTACTCAATATTCATTATCCAGGTCTTCCTCCTTCTCCACCTTCAATTCCCTCAAACATTGACAGCCCATTATTCCCTGGTGATGACAACAATGGAACAATGATGAAACCCTTGGGAGTGGCTATACCAAGGAAAGAAAAGAAAGGGAATGGAAAAATCATGATTTTAGGGATTGTGCTGTCATCTTGTACAGCCTTTACTATATTTGTTGGATTTGCATGGCTTTGTCTGAGGAAATTTGGCCCTTGTGTTCATGAGCTCAAACAAATTCCAAACACAATTCCATCCGCTTCAAAACTATCAGGGAGTACCAAGTCACTGCCTAATAGGAGCATGCCAGGATTTAGTTCTACGTGCTCAAGTTCTAAAACGATAACTTATACAGGATCTGCCAAGACTTTTACTCTAAATGACATAGAGAAAGCAACTAACAACTTTGATGCTTCAAGAATATTAGGAGAAGGGGGATTCGGCCCTGTTTATAAGGGGGTTTTATATGATGGAAGGGATGTGGCTGTGAAGATTCTGAAGAGAGATGATCGGCATGGTGGCCGAGAATTCTTAGCAGAAATTGAGATGCTTGGCCGTCTGCACCATAGAAATTTAGTCAAATTAATAGGTATTTGCATAGAGAAACAGACTCGGTGCCTGGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGGTGCTGACAAGGAAACTAATCCACTTGATTGGAATGCCCGGATGAAGATTGCCCTTGGTGCAGCTCGTGCCTTGGCTTACCTGCATGAAGATTCAAATCCTTGTGTCATACATCGGGACTTTAAATCCAGCAACATCTTGTTGGAACATGATTTTACACCCAAGGTTTCAGATTTTGGATTAGCAAGAACTGCCATGGACGAGGGAAACAAGCACATCTCCACACATGTTATGGGAACATTCGGCTACTTAGCACCCGAATATGCAATGACAGGCCATGTTTTGGTCAAAAGTGACGTTTACAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTGGATTTCTCACAACCACCAGGTCAAGAAAACCTCGTTGCTTGGGTTCGTCCCCTTCTCACAAGTAAAGAGGGTTTAGAGATGATCATAGACCCAGTTATAAAGCCTGAAATCCCCATTGATTCTGTTGTAAAAGTTGCAGCAATTGCATCAATGTGTATCCAACTTGAAGTCTCTCAACGCCCATTCATGGGTGAAGTTGTTCAGGCTTTGAAGTTGGTATGTAGTGAACTTGAGGAAACAAGCACAAGAAAATTAAGCAGTTTCCGAGAAGAGGGACTTCAAGCCAAAGTAGGTGAACCATCTTCAAGAATGTCAGGTGAGATAGTGGGTTTTTCAGATCAGGTAACCAAAGTAACATTATCAACCTCGGAGATTTTCAGCACATCAGGCCAGTGTATTGAGCCATTCAGGAGGCAATCCGCTTCTGGGCCTCTCACTACAGGAAAGAAAAAGCAGTTTTGGCAGAAACTGAAGAGTTTGTCTAGAGGAAGTATGAGTGAGCATGGGTCTTCAGCTCAACAATGGTCTGGTTCCGAGTAA 2559 0.4361 MLSLLSLTYFFNSGQSCRIDQQKMALGLLFFLIIKLHLVVGATHFHGYEATKQRHSRSHTSIALPPSKSSYGVPASIAVPPSKSLAKAPIKERTHGLIGSPIFHQGHHHYSRRKSSEPAAPEPTYAVHPPTYSHQGIAPSVFQPQPPFSSPSGWKLPAPAPSPAVLSIPLNVPSPSPGITPQGSPWRKMKAPPTKPVLSLPPPPPNKDCLWVSCSEPFTYAPPGSPCGCVWPLKVKLRLSVSIYKFFPLVSKLAEEIAASVSLNHNQVRIVGADEAGQQLEKTIVLINLVPTGSRFDDAMAFSIYKKFWHQEVHTDASLFGACEVLNIHYPGLPPSPPSIPSNIDSPLFPGDDNNGTMMKPLGVAIPRKEKKGNGKIMILGIVLSSCTAFTIFVGFAWLCLRKFGPCVHELKQIPNTIPSASKLSGSTKSLPNRSMPGFSSTCSSSKTITYTGSAKTFTLNDIEKATNNFDASRILGEGGFGPVYKGVLYDGRDVAVKILKRDDRHGGREFLAEIEMLGRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHGADKETNPLDWNARMKIALGAARALAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTAMDEGNKHISTHVMGTFGYLAPEYAMTGHVLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVAWVRPLLTSKEGLEMIIDPVIKPEIPIDSVVKVAAIASMCIQLEVSQRPFMGEVVQALKLVCSELEETSTRKLSSFREEGLQAKVGEPSSRMSGEIVGFSDQVTKVTLSTSEIFSTSGQCIEPFRRQSASGPLTTGKKKQFWQKLKSLSRGSMSEHGSSAQQWSGSE 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0535 852 Pfam Protein tyrosine and serine/threonine kinase 473 743 IPR001245 GO:0004672|GO:0006468
Mibi04g0535 852 FunFam receptor-like serine/threonine-protein kinase ALE2 443 545 - -
Mibi04g0535 852 SUPERFAMILY Protein kinase-like (PK-like) 444 743 IPR011009 -
Mibi04g0535 852 MobiDBLite consensus disorder prediction 833 852 - -
Mibi04g0535 852 FunFam Receptor-like serine/threonine-protein kinase ALE2 546 760 - -
Mibi04g0535 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 592 604 IPR008271 GO:0004672|GO:0006468
Mibi04g0535 852 Gene3D Transferase(Phosphotransferase) domain 1 546 766 - -
Mibi04g0535 852 Gene3D Phosphorylase Kinase; domain 1 440 545 - -
Mibi04g0535 852 MobiDBLite consensus disorder prediction 177 200 - -
Mibi04g0535 852 ProSiteProfiles Protein kinase domain profile. 470 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0535 852 PANTHER OS01G0750732 PROTEIN 201 757 - -
Mibi04g0535 852 CDD STKc_IRAK 476 744 - -
Mibi04g0535 852 MobiDBLite consensus disorder prediction 101 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0535 Mibi-ChrMibi04 10363938 10368266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0535 206 843 Receptor kinase-like Gene Family AT5G56890 58.689 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Mibi04g0535 PK_Tyr_Ser-Thr 2.2e-48 CL0016