Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0533 ATGTATCGAGTAGCTTCCAAGTTAGCTTCCTCCATCAGCTCATCCTCTTCCAGAAAACTTGTGTATAATGGGATAATATCCAACAGAAATTATGTGGCGAAAGATATCAACTTTGGAATTGGAGCTCGTGCTGCAATGCTTCAAGGGGTTTCTGAGGTTGCAGCGGCTGTAAAAGTAACCATGGGACCTAAGGGCCGCAATGTGATCATTGAGCAAAGTCATGGAAAACTCAAGATTACAAAGGATGGAGTGACCGTCGCCAGAAGTGTTCAATTTGAAGACAAGGCCAAAAATCTTGGTGCTGATCTTGTGAAGCAGGTGGCTAAGGCTACCAATACTTCTGCTGGAGATGGTACAACTTGTGCAATTGTTCTTACTCAGGCTATACTCACAGAAGGTTGCAAAGCAATTGCTTCTGGTGTAAATGTCATGGATTTGCGAAACGGGATAAATAAGGCAGTTGATGCTGTAGTAACTGCTTTGAAAAGCAGAGCATTAATGATTAGCACGCCAGAAGAGATAACCCAGGTTGGAACTATATCTGCTAATGGAGAGCATGATATTGGAGAACTTATTGCAAGAGCAATGGCAAAAGTTGGAAAGGAGGGGGTCATTACTGTTACTGACGGGAATACTTTGCATAATGAGTTGGAAGTGGTAGAAGGAATGAAGCTGACTAGAGGCTATATGTCTCCTTATTTTATTACTGATCATATAACCCAGAAATGTGAATTGGAGCACCCCCTTATACTAATCCATGAGAAGAAAGTATCAGACATGAACTCACTAGTGAAAATATTGGACCTAGCGATGAAGAAACATAGGCCGCTTCTTCTTGTTGCGGAGGATGTTGATAGTAATGCTTTGTCTATGCTCATACTCAACAAACATCGTGGTGGGCTGAAGGTTTGTGCTGTAAAAGCTCCTGGTTTTGGTGAAAACAGAAAAGCTGTTTTAGATGATTTAGCCGTTCTTACGGGAGGAGAGGTCATCACAGAAGAACGAGGTTTGACCCTTGATAAAGTCCAGCTAGAAATGCTTGGTTCTGCCAAAAAGGTTACAGTTTCTGCTGATGATACTATTATTCTACATGGCGGTGGGGATAAGAAGCTCATTGAAGATAGATGTGAGCAGCTCAGGGCAGCAATTGAAGCGAGCACTGCCACATTTGATAAAGAGAAAGCACAGGAACGACTTTCAAAGCTGTCTGATGGTGTAGCTATTTTCAAGGTTGGAGGGGCTAGCAAAGCAGAAGTCGGGGAACGGAAAGATAGGGTGACCGATGCTTTAAATGCTACAAGAGCAGCTGTGGAGGAGGGAATTGTGCCAGGTGGTGGAGTTGCTCTCTTATATGCTAGTAAAATATTGGACAACCTTAAAACCCAAAACGAGGATGAGAAAAGAGGAGTAGAGATAATTAAGAATGCACTTAAGGCACCTGCATTCACAATAGCTTGCAATGCTGGTTTTGATGGTGCTTTAGTTACTGGGAAATTGTTGGAACAAGACAAGGAGAGATTTGGTTTTGATGCTGCCAAAGGTGTTTATGTTGACATGGTGGAATCTGGAATTATAGATCCTCTTAAAGTTGTCAGAACAGCTTTGGTTGATGCTGCGAGTGTGTCGTTGCTGCTGACGACGACTGAGGCGACTGTGGTGGTTGCTTCGACCAGTAATACTCCAAAACGTGTGGCAGATATTGATGCAATGGGCATCTAA 1719 0.4293 MYRVASKLASSISSSSSRKLVYNGIISNRNYVAKDINFGIGARAAMLQGVSEVAAAVKVTMGPKGRNVIIEQSHGKLKITKDGVTVARSVQFEDKAKNLGADLVKQVAKATNTSAGDGTTCAIVLTQAILTEGCKAIASGVNVMDLRNGINKAVDAVVTALKSRALMISTPEEITQVGTISANGEHDIGELIARAMAKVGKEGVITVTDGNTLHNELEVVEGMKLTRGYMSPYFITDHITQKCELEHPLILIHEKKVSDMNSLVKILDLAMKKHRPLLLVAEDVDSNALSMLILNKHRGGLKVCAVKAPGFGENRKAVLDDLAVLTGGEVITEERGLTLDKVQLEMLGSAKKVTVSADDTIILHGGGDKKLIEDRCEQLRAAIEASTATFDKEKAQERLSKLSDGVAIFKVGGASKAEVGERKDRVTDALNATRAAVEEGIVPGGGVALLYASKILDNLKTQNEDEKRGVEIIKNALKAPAFTIACNAGFDGALVTGKLLEQDKERFGFDAAKGVYVDMVESGIIDPLKVVRTALVDAASVSLLLTTTEATVVVASTSNTPKRVADIDAMGI 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0533 572 Gene3D - 167 440 IPR027410 -
Mibi04g0533 572 Gene3D GroEL 222 403 IPR027409 -
Mibi04g0533 572 PANTHER 60 KDA HEAT SHOCK PROTEIN, MITOCHONDRIAL 32 560 - -
Mibi04g0533 572 Gene3D - 36 553 IPR027413 -
Mibi04g0533 572 TIGRFAM GroEL: chaperonin GroL 33 553 IPR001844 GO:0042026|GO:0140662
Mibi04g0533 572 Coils Coil 456 476 - -
Mibi04g0533 572 Pfam TCP-1/cpn60 chaperonin family 53 552 IPR002423 GO:0005524
Mibi04g0533 572 SUPERFAMILY GroEL apical domain-like 215 406 IPR027409 -
Mibi04g0533 572 CDD GroEL 34 553 IPR001844 GO:0042026|GO:0140662
Mibi04g0533 572 PRINTS 60kDa chaperonin signature 380 405 IPR001844 GO:0042026|GO:0140662
Mibi04g0533 572 PRINTS 60kDa chaperonin signature 298 321 IPR001844 GO:0042026|GO:0140662
Mibi04g0533 572 PRINTS 60kDa chaperonin signature 113 140 IPR001844 GO:0042026|GO:0140662
Mibi04g0533 572 PRINTS 60kDa chaperonin signature 428 449 IPR001844 GO:0042026|GO:0140662
Mibi04g0533 572 PRINTS 60kDa chaperonin signature 57 83 IPR001844 GO:0042026|GO:0140662
Mibi04g0533 572 ProSitePatterns Chaperonins cpn60 signature. 435 446 IPR018370 GO:0005524|GO:0006457
Mibi04g0533 572 SUPERFAMILY GroEL equatorial domain-like 37 552 IPR027413 -
Mibi04g0533 572 FunFam 60 kDa chaperonin 222 403 - -
Mibi04g0533 572 SUPERFAMILY GroEL-intermediate domain like 168 235 IPR027410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0533 Mibi-ChrMibi04 10308949 10313733 Dispersed