Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0525 ATGTCTAATTTGATGACTTCTTCTTCTTCATCCCAATCTCATCATCATCTTCAGCCAGTGAAGAAAAAGAGGAACCTCCCAGGCAACCCAGACCCTGAAGCAGAAGTGATAGCCTTATCTCCAAAGACACTTTTAGCAACAAATAGGTTCATATGTGAGATCTGCAACAAAGGGTTTCAGAGGGATCAGAACTTGCAGCTACATAGAAGAGGGCACAATCTGCCATGGAAGCTGAAGCAGAGAACGAGTAAAGAGATGATAAGGAAGAAAGTGTATGTGTGTCCTGAACCAACTTGCGTTCACCATGACCCTTCAAGGGCACTTGGAGATCTCACAGGGATCAAGAAGCACTTTTGCAGGAAGCACGGTGAGAAGAAATGGAAATGTGAAAAGTGTTCAAAGAGGTATGCTGTTAAATCTGATTGGAAGGCTCATTCCAAAACATGTGGCACCAGAGAGTACAAATGTGACTGTGGAACTCTCTTCTCTAGGTAA 495 0.4343 MSNLMTSSSSSQSHHHLQPVKKKRNLPGNPDPEAEVIALSPKTLLATNRFICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTSKEMIRKKVYVCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVKSDWKAHSKTCGTREYKCDCGTLFSR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0525 164 Gene3D Classic Zinc Finger 46 73 - -
Mibi04g0525 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 72 IPR013087 -
Mibi04g0525 164 MobiDBLite consensus disorder prediction 1 34 - -
Mibi04g0525 164 Pfam Zinc-finger double-stranded RNA-binding 50 72 IPR022755 -
Mibi04g0525 164 Gene3D Classic Zinc Finger 85 164 - -
Mibi04g0525 164 FunFam protein indeterminate-domain 12-like 29 98 - -
Mibi04g0525 164 SUPERFAMILY beta-beta-alpha zinc fingers 49 147 IPR036236 -
Mibi04g0525 164 MobiDBLite consensus disorder prediction 1 15 - -
Mibi04g0525 164 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Mibi04g0525 164 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 8 164 IPR031140 -
Mibi04g0525 164 SMART c2h2final6 92 122 IPR013087 -
Mibi04g0525 164 SMART c2h2final6 127 147 IPR013087 -
Mibi04g0525 164 SMART c2h2final6 50 72 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0525 Mibi-ChrMibi04 10250809 10251514 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0525 6 164 IDZ Gene Family AT1G55110 80.000 1.17e-97 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mibi04g0525 zf-C2H2_jaz 1.7e-05 CL0361