Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0522 ATGGATGGTTCATCAGAAATCGGAGGAGGAGGAGGAAGCTACAACCTCCAAAACAGCAACGAGGAGGACGAATTGGACCTCAGGCGAGGCCCATGGACCGTCGATGAAGACCTCACTCTCATCAATTACATCACCACTAACGACGAAGGTCGCTGGAATTCCCTCGCCCGTTCCGCCGGCCTGAAACGAACCGGTCAGAGCTGCAGATTGAGGTGGCTCAACTATCTCCGCCCCGACATCCGACGTGGCAACATCACCCTCGAAGAACAGCTCCTCTTTCTCGAGCTTCAATCTCGCTATGGTAACAGCACGCAATTCAAGGACACCATGCGTTACCTCTGGATGCCTCGCCTAGTCGAGCGCGTCCAAGCCTCCGCCGCCGCCTCCTCCTCCGGAAGTAGTAACTACACGGCGGCTTCTTCTGACTCCCTCGGGTCAACTCAGGTGTCTAACCTCACTGACCATTATTGTCATGCACTATAG 483 0.5528 MDGSSEIGGGGGSYNLQNSNEEDELDLRRGPWTVDEDLTLINYITTNDEGRWNSLARSAGLKRTGQSCRLRWLNYLRPDIRRGNITLEEQLLFLELQSRYGNSTQFKDTMRYLWMPRLVERVQASAAASSSGSSNYTAASSDSLGSTQVSNLTDHYCHAL 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0522 160 Pfam Myb-like DNA-binding domain 29 76 IPR001005 -
Mibi04g0522 160 SUPERFAMILY Homeodomain-like 30 103 IPR009057 -
Mibi04g0522 160 CDD SANT 31 76 IPR001005 -
Mibi04g0522 160 Gene3D - 29 81 - -
Mibi04g0522 160 MobiDBLite consensus disorder prediction 1 28 - -
Mibi04g0522 160 SMART sant 28 78 IPR001005 -
Mibi04g0522 160 ProSiteProfiles Myb-like domain profile. 24 76 IPR001005 -
Mibi04g0522 160 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 26 80 IPR017930 -
Mibi04g0522 160 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 102 138 IPR044676 GO:0003700|GO:0006355|GO:0043565
Mibi04g0522 160 FunFam Myb transcription factor 29 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0522 Mibi-ChrMibi04 10193914 10194975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0522 16 123 MYB Transcription Factor Family AT3G06490 58.621 2.19e-46 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mibi04g0522 Myb_DNA-binding 1.4e-11 CL0123