LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mibi04g0486	ATGTACTGTGCATCTACCTTCAGGGCTTGGGACATTTTCCAGTTCATTAAGAACTTGGCGAATTTGAGGGAGATAGACCTTAAACAATCTAAACAATTGATAGAGTTGCCAGATTTACGTATGGCTCAAAATCTTGAAGGGGTGAATCTTCAAGAGTGTCAAAGTTTAAGCCATATTGATCCACACATTTTCTCTCTCCCGAGATTATACTGGGTGGGACTTTACGGCTGCATAAACTTAAAGAGTTTGAAAGCTAATAGTCAGTCAAAATCGATCAAAATTTTAGATGTTCAACATTGCTATGGTCTCAAGGAATTTTCATTCTCTTCAGAGAAAATGACTGATTTACGGTTAGATTTGTTGCATGTTGAGGGATTGGACTTTTCGTTAGGGCCTATGGAGAAAATCGAAGGGCTCAGTCTCAACTGCTCACCACTAACAAATCTTCCCATTAATGATATTTGTTGCATGAGATCTCTTGAGTTGCTTCATCTTTATAATTGTGGAGGACTAATTGACACATCAAAGCTCCACACCTTGTTCGATGCTTTGCTATCTCTAAGAAACATTTTGTTGGATGGGGCATGCAAATTATCTGAACTTCCAAACAATATCAAGAATCTCTCAATGCTAGAAATACTTATCATAAGAAATTGTAAGAGCCTTCAATCCTTACCAGAGGTTCCATCATCCATTGAAAATTTACTTGTCGACGGATGCTCATCATTAATGACGCTACAACTCACTTCTTATATTGAATCTTCGTTGGGTCCAATACTCTGTTCCTCAGTTAGTTATCTTAGAAATCTTAGAGAGCTTGATCTTCGTGAGTGTGAACAATTGTATGAACTCCCTGTATCCATCGGCTCCTTATCTTCGTTACGGAAATTGGATTTAAGTGGAAGTAATGTAGAGAGCTTGCCTGTCAGCATTAAGCATCTTTCAAATTTAAAATCAATGTACTTGAGAAATTGTAGAAGACTTCGTTCTCTGCCAGAACTGCCTCCATTCATCAGACATGTTCATGCTAATGACTGCATATCATTGGATAATCACTCTTTATCTTGTGTTGAATCTTCATTGTTAGAAGATGAAATAACGTTGGGTCCAATACTCTGTTCCTCAAATCACTCTTTATCTCGTGTTGCGGAAAATGTTTATTACTCCTTTAAGCCGTCAATGTACATAGAAGGAATACGTTTTGTTTGTTACCCTGGAAGGAAAGCTCCAAACTGGTTTAGCTCTGATCAGGTGACAAATGCTTCCAACTATAGTATTGATCAAATATGGGATGATGTGGTTATTGCTATCACAGAAAATTCTAACTGCAGCCAGCTGAGAGTCAAGGTTGGAGTGCTGCTGCTTCATTTGGTCTTCTCTTCTCGACCAACTTCTTCAAAAGAAAAGTATGATGCGTTCATAGCGTTCTTGGAGATAAAAGAAAAATGA	1449	0.3796	MYCASTFRAWDIFQFIKNLANLREIDLKQSKQLIELPDLRMAQNLEGVNLQECQSLSHIDPHIFSLPRLYWVGLYGCINLKSLKANSQSKSIKILDVQHCYGLKEFSFSSEKMTDLRLDLLHVEGLDFSLGPMEKIEGLSLNCSPLTNLPINDICCMRSLELLHLYNCGGLIDTSKLHTLFDALLSLRNILLDGACKLSELPNNIKNLSMLEILIIRNCKSLQSLPEVPSSIENLLVDGCSSLMTLQLTSYIESSLGPILCSSVSYLRNLRELDLRECEQLYELPVSIGSLSSLRKLDLSGSNVESLPVSIKHLSNLKSMYLRNCRRLRSLPELPPFIRHVHANDCISLDNHSLSCVESSLLEDEITLGPILCSSNHSLSRVAENVYYSFKPSMYIEGIRFVCYPGRKAPNWFSSDQVTNASNYSIDQIWDDVVIAITENSNCSQLRVKVGVLLLHLVFSSRPTSSKEKYDAFIAFLEIKEK	482

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mibi04g0486	482	Gene3D	Ribonuclease Inhibitor	232	360	IPR032675	-
	Mibi04g0486	482	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57	262	416	-	-
	Mibi04g0486	482	Pfam	Leucine rich repeat	268	326	IPR001611	GO:0005515
	Mibi04g0486	482	Gene3D	Ribonuclease Inhibitor	5	231	IPR032675	-
	Mibi04g0486	482	SUPERFAMILY	L domain-like	11	381	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mibi04g0486	Mibi-ChrMibi04	9215162	9220682	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mibi04g0486	142	327	WRKY Transcription Factor Family	AT4G12020	27.419	3.56e-09	57.8