Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0459 ATGGGCCTACGTAAATTAAGATCAAAGATTAAGAGGAGCAATCTTTACACATTTGCTTGTCTTAGGCGGAGTCCCACTGTAAATGAGAATGCTCACAGCTTTCATGGTCCTGGTTTTTCAAGAGTTGTACATTGCAACCACCCTTATCTCCCTGAAACGAAGCCTCAATTTTACTGCCAGAATATTATATCAACTACAAAATACAATGTTGTAACATTTTTACCTAAGGCACTTTATGAGCAATTTCGACGGGTTGCTAATATATACTTCCTTGTGGCTGCATGCCTCTCTGCCTTTCCAATCTCACCGTTCTCTTCAATCAGCATGATTGCTCCTTTGGCATTTGTTGTTGGGCTTAGTATGGCAAAGGAAGCATTGGAAGATTGGCGCAGGTTTAGTCAGGATGTCAAAGTTAACCAGCGGAAAGCTAGGGTCCATGAAGGCAATGGTGTTTTTTCTCTTAAGCAATGGCAGGACATTGTGGTTGGGGATGTAGTAAAAGTAGATAAGGACCAATTTTTTCCTGCTGATTTGTTTTTCTTATCATCTAGTTATGAGGATGGGATATGCTATGTGGAAACTATGAATTTAGATGGTGAGACAAACCTAAAGGTGAAAAGATCCTTGGAGGTTACCATGCTTCTGTATAATGATGAGTCTTTTAAAGATTTTACAGGAATAATTCGTTGTGAAGACCCAAATCCTAGTCTCTACACATTTGTTGGAAATTTTGAGTATGAATGTGAGATTCATCCTATTGAGCCCTGTCAAATTCTCCTCCGTGATTCAAAGCTCAGAAATACTGATTTCATATATGGAGTGGTCATTTTCACTGGTCATGAAAGCAAAGTGATGCAGAATTCTACAAAATCTCCTTCAAAAAGGAGCAAAATAGAGAGAAAGATGGATTACATCATATACATTCTGTTCACTGTTCTCATTTTGATATCCTTGGTCAGTTCAGCAATATTCTCTGTAATCACTAGATTCCAAACAATAAATTGGTGGTATCTAATACCCATGCAAACAGATGTCTTGTATGATCCCAAAAATGCTACAGTAGCTGGGTTGAGTCATCTGGTTACTGCACTCATTCTTTATGGATATTTGATACCCATATCACTTTATGTTTCAATTGAGGTTGTGAAGGTTTTACAAGCAAACTTGGTTGAACAAGACTTGCACATGTATCATGACGAAACTGGAACTCCCGCTCATGCCCGAACGTCAAATTTGAATGAAGAGTTGGGTCAAGTGGACACTATACTTTCTGATAAGACTGGAACTTTAACCTGCAATCAGATGGATTTTTTAAAGTGTTCCATTGCTGGTGTTGCATATGGTGTGAGCTCCAGTGAAGTTGAACTTGCTACAGCACAGCAGATGGCTCTTGAACTGGAGGAGGACCAGCAGGAGGGTCTCTCCCATACACCCACGGATGAGAGTGAGGCATCTGTTCCATGGGAAAATGTTGACCTGGAGACTGTTGTTACCTCCAAGGGTGATGAGGCTCAGAAGGCTACCATAAAGGGTTTCAGATTTGAGGACATTCGCCTCATGAACTGTAACTGGTTGAAAGAGTCCAATCCTGATGTCCTTTTATTGTTTTTTCGAATATTAGCTGTTTGTCATACTGCCATTCCTGATCTGAATGAGGAGACAGGAGCTTTGACTTATGAGGCTGAATCCCCTGACGAAGGGGCTTTCCTAGCAGCATCAAGAGAATTTGGTTTTGAGTTTTGTAAACGAACTCAAGCAAGTGTTTTCATCCGTGAAAAACTTTCACCTTCAGAACAAGCTGTTGAAAGAGAGTACAAAATCCTGAATTTATTGGACTTTACTAGCAAAAGAAAGCGAATGACAGTGATTGTGCGTGATGAGGAGGGAAGCTTACTTCTTATGTGCAAAGGGGCTGACAGTATCATATTTGATCGACTGTCAAAGAATGGAAAGACATATTTAGAGGCTACAACCATACATTTGAACGAATATGCAGAAAATGGTTTGAGAACGTTGGCTCTAGCTTATAGAAAGCTTGATGAGGAAGAGTACAATGCTTGGAACAATGAGTTTCAGAAAGCCAAAACGACTGTTTGGCCTGACAGAGAGGCAGTGCTTGAAGAATTAGCTGAAAGAATGGAAAAAGAGCTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAACTGCAAAATGGGGTTCCCCAATGCATTGATAAACTTGCACAAGCAGGTCTCAAGATCTGGGTTTTGACGGGGGATAAGATGGAAACTGCAATCAATATTGGGTCTGTCTACCAAAAGTTGTTTAACACATTTTTGCTTCGACAGGGCATGAAGCAGATCTGCATATCTATTCCAGAGGCTTACTCAGTTACCAACTTTGGCAAAAAGGCCATTAAGGAGGGCATTTTGAATCAAATCATCAATGCCTCTCAAATGATAAAGCTGGAGAAAGATCCACATGCTGCATTTGCATTAATTATTGATGGGAAGGCGCTGGCATATACTTTAAAAGATGATATGAAGCATCAATTTTTAGGATTGGCTGTTGATTGCGCCTCTGTCATTTGCTGTCGTGTGTCTCCCAAGCAAAAGGCATTGGTGACAAGATTAGTTAAAGATGGCACTGGGAAGACCACTTTAGGAATAGGTGATGGTGCAAATGACGTCGGCATGATTCAAGAAGCAGATATTGGCGTTGGTATTAGTGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGTGACTTCGCTATTGCCCAATTTAAATATTTGGAACGACTTTTGGTAGTCCATGGACACTGGTGCTACAAGAGAATAGCTCAAATGATATGCTATTTCTTCTACAAAAACATAGCTTTTGGGCTCACTATCTTCTATTTTGAGGCCCTGACAAGCTTTTCTGGGCAATCAGTTTATAATGACTGGTACATGTTATTGTTCAATGTTGTTCTTACATCATTACCTGTCATTTCGCTTGGGGTTTTTGAACAAGATGTTCCATCAGAAGTTTGCTTACAGTTTCCTGCAGTATATCAGCAAGGCCCAAAAAATTTGTTCTTTGACTGGTTTAGAGTACTGGGATGGATGCTCAATGGTCTACTTTGCTCCCTTGTTGTCTTCCTATTCAACATCTACATTTTTTATGACCAAGCCTTCCGAGATGATGGCCGAACCCCAGACATGGCTGTTGTTGGGACCACAATGTTCACTTGCATCATTTGGGCTGTCAACTGCCAGATTGCACTCACCATTTGCCATTTCACATGGATGCAATACATATTTATAATAGGTAGTATAACCTTTTGGTACATATTCCTGGTGCTATATGGCATGCTTTCACCAACCTATTCAAAAACAGCCTACCAAATCCTGCTTGAAGTTCTTGCTCCTGCACCAGTGTATTGGTTGGCGACTTTTCTAGTAACAATTACTTGTAATTTTCCTTATTATGCCCATATATGCTTTCAAAGATGGAAAAATCCCTTGGATCATCAAATCATCAGAGAGATCCAGCACTATAGGAAGGACGTTGAGGACCAACGCATGTGGAGGAGGGAAAGCTCTAAAGCAAGACAGAAAACCAGTATTGGATTTAGTGCAAGAGTGGAAGCTACGATGAGAAACTTGAAACACAAGTTGCAGAGGAAGCAATCAGCCTTACCTTTCATGTCTTCTCCAGATGAACATTTCCAATAA 3696 0.4058 MGLRKLRSKIKRSNLYTFACLRRSPTVNENAHSFHGPGFSRVVHCNHPYLPETKPQFYCQNIISTTKYNVVTFLPKALYEQFRRVANIYFLVAACLSAFPISPFSSISMIAPLAFVVGLSMAKEALEDWRRFSQDVKVNQRKARVHEGNGVFSLKQWQDIVVGDVVKVDKDQFFPADLFFLSSSYEDGICYVETMNLDGETNLKVKRSLEVTMLLYNDESFKDFTGIIRCEDPNPSLYTFVGNFEYECEIHPIEPCQILLRDSKLRNTDFIYGVVIFTGHESKVMQNSTKSPSKRSKIERKMDYIIYILFTVLILISLVSSAIFSVITRFQTINWWYLIPMQTDVLYDPKNATVAGLSHLVTALILYGYLIPISLYVSIEVVKVLQANLVEQDLHMYHDETGTPAHARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGVAYGVSSSEVELATAQQMALELEEDQQEGLSHTPTDESEASVPWENVDLETVVTSKGDEAQKATIKGFRFEDIRLMNCNWLKESNPDVLLLFFRILAVCHTAIPDLNEETGALTYEAESPDEGAFLAASREFGFEFCKRTQASVFIREKLSPSEQAVEREYKILNLLDFTSKRKRMTVIVRDEEGSLLLMCKGADSIIFDRLSKNGKTYLEATTIHLNEYAENGLRTLALAYRKLDEEEYNAWNNEFQKAKTTVWPDREAVLEELAERMEKELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGSVYQKLFNTFLLRQGMKQICISIPEAYSVTNFGKKAIKEGILNQIINASQMIKLEKDPHAAFALIIDGKALAYTLKDDMKHQFLGLAVDCASVICCRVSPKQKALVTRLVKDGTGKTTLGIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFAIAQFKYLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEALTSFSGQSVYNDWYMLLFNVVLTSLPVISLGVFEQDVPSEVCLQFPAVYQQGPKNLFFDWFRVLGWMLNGLLCSLVVFLFNIYIFYDQAFRDDGRTPDMAVVGTTMFTCIIWAVNCQIALTICHFTWMQYIFIIGSITFWYIFLVLYGMLSPTYSKTAYQILLEVLAPAPVYWLATFLVTITCNFPYYAHICFQRWKNPLDHQIIREIQHYRKDVEDQRMWRRESSKARQKTSIGFSARVEATMRNLKHKLQRKQSALPFMSSPDEHFQ 1231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0459 1231 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 430 683 IPR023299 GO:0000166
Mibi04g0459 1231 Pfam Phospholipid-translocating ATPase N-terminal 43 110 IPR032631 -
Mibi04g0459 1231 Gene3D - 716 923 IPR023214 -
Mibi04g0459 1231 PRINTS P-type cation-transporting ATPase superfamily signature 883 902 - -
Mibi04g0459 1231 PRINTS P-type cation-transporting ATPase superfamily signature 423 437 - -
Mibi04g0459 1231 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 33 1185 - -
Mibi04g0459 1231 Pfam Cation transport ATPase (P-type) 543 647 - -
Mibi04g0459 1231 FunFam Phospholipid-transporting ATPase 720 923 - -
Mibi04g0459 1231 SFLD p-type atpase 405 934 IPR044492 -
Mibi04g0459 1231 Coils Coil 449 469 - -
Mibi04g0459 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 56 1159 IPR023298 -
Mibi04g0459 1231 Gene3D - 114 289 - -
Mibi04g0459 1231 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 855 964 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mibi04g0459 1231 CDD P-type_ATPase_APLT_Dnf-like 60 1042 - -
Mibi04g0459 1231 SFLD Haloacid Dehalogenase 405 934 - -
Mibi04g0459 1231 Pfam Phospholipid-translocating P-type ATPase C-terminal 911 1161 IPR032630 -
Mibi04g0459 1231 SUPERFAMILY HAD-like 411 927 IPR036412 -
Mibi04g0459 1231 SUPERFAMILY Calcium ATPase, transduction domain A 142 287 IPR008250 -
Mibi04g0459 1231 FunFam Phospholipid-transporting ATPase 587 718 - -
Mibi04g0459 1231 FunFam Phospholipid-transporting ATPase 119 289 - -
Mibi04g0459 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 425 431 IPR018303 -
Mibi04g0459 1231 Gene3D - 583 695 IPR023299 GO:0000166
Mibi04g0459 1231 Coils Coil 1199 1219 - -
Mibi04g0459 1231 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 58 1169 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0459 Mibi-ChrMibi04 8565135 8572824 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0459 1 1227 Primary Pumps ATPases AT1G17500 69.438 0.0 1796