Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0455 ATGGAAACATCTTGTTCTCTCAGTTATGACGTCACTAATAATTTCGTTGACTCTGGCTATTACTCAAGTGTCATTTTTGTGAACACTAGGCGTAAGGTCGATTGGCTTACTGATAAGATGAGAAGCAATGACCATACTGTGTCAGCTACACTTGTCTCATTGGTTATAAACTTGGATATGCCAACACAACCTGAGAATTATCTTCATAGGATTGGAAGGAGTGGAAGGTTTGGAAGGAAAGGTGTTTCTGTGAACTTTGTGACCAATGAAGATTCGAAGATGATGTTTGATATTCAAAAGTTCTATAATGTCACCGTAGTTGAGCTGCCAGCAAATGTTGCAGATATGATCTGA 354 0.387 METSCSLSYDVTNNFVDSGYYSSVIFVNTRRKVDWLTDKMRSNDHTVSATLVSLVINLDMPTQPENYLHRIGRSGRFGRKGVSVNFVTNEDSKMMFDIQKFYNVTVVELPANVADMI 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0455 117 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 116 IPR027417 -
Mibi04g0455 117 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 52 117 IPR001650 -
Mibi04g0455 117 Gene3D - 50 115 IPR027417 -
Mibi04g0455 117 Pfam Helicase conserved C-terminal domain 52 78 IPR001650 -
Mibi04g0455 117 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 52 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0455 Mibi-ChrMibi04 8546690 8547354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0455 23 117 Eukaryotic Initiation Factors Gene Family AT1G72730 59.091 1.09e-46 153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1441 11 34005681 34008013 Mibi04g0455 04 8546690 8547354 CCT
Mibi04g0455 04 8546690 8547354 Mibi04g0455 04 8546690 8547354 ECH