Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0453 ATGGGAAATCAAAAGCACAAGTGGGCAGCCTACGAGGAAGAAGCTTTGCTCGCCGGCATTAACAAACATGGCGCCGGAAAGTGGAAGAATATCCTTAATGATCCCGAATTTGCCCCTTTTCTCACCTTCCGTTCCAACATCGATCTAAAGGATAAATGGAGAAATTTAAGTGTTAATAATGGAGAAAAGCCTAAGAATCCAAAGATTAAGACTACGGAACCTCCTACACCTGCACCTGCAGGCACGCAAAATGCTCTTGTTGTTCCTCCACTTCGTGCATGTGCAACTTCTGATGCCGCCGCAGATGATTCTTCTCACAATTCACAGGATGTCAAACAAACTCCTCAGTACAATTCAATGATTTTTGAAGCCCTATCAATGATAAGTGATGATAATGGACCTGACCTTAATGCTATTGTTAGCTTCATTGAGAAAAGGCACAAGGTTCCTCAAAATTTCAGAAAAGCAGTAGGTGCAAGGTTGAGGAAGCTTGTTGATCAAGGAAAACTTGAAAAGGTACAAAATTGTTACAGGGTAAAGAGAGCGACACCTCTGGAGACAAAACAACCTGCACCGAAACGAATTGATTCCAGGCCATATCAATCACTGGCTTCTGGATTTACAGCATCTCATGGGACAGTAAGGGATGCAGTGGAGATTTCAACATGCAGAGTCGCTGAAGCGGAGGACAAATCACATTTGGCTGCTGAAGCAGTCAAGGAGGCAGAAAAATTATCGAAGTTGGCTGAAGATGCTGATGCAATGTTACAACTAACCGAAGAGATTTATGAGCAATGTTCACGGGGTGAAATAATCATCTTGGCTTAA 828 0.4287 MGNQKHKWAAYEEEALLAGINKHGAGKWKNILNDPEFAPFLTFRSNIDLKDKWRNLSVNNGEKPKNPKIKTTEPPTPAPAGTQNALVVPPLRACATSDAAADDSSHNSQDVKQTPQYNSMIFEALSMISDDNGPDLNAIVSFIEKRHKVPQNFRKAVGARLRKLVDQGKLEKVQNCYRVKRATPLETKQPAPKRIDSRPYQSLASGFTASHGTVRDAVEISTCRVAEAEDKSHLAAEAVKEAEKLSKLAEDADAMLQLTEEIYEQCSRGEIIILA 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0453 275 Gene3D - 8 82 - -
Mibi04g0453 275 Gene3D - 109 194 IPR036388 -
Mibi04g0453 275 PANTHER SINGLE MYB HISTONE 4 1 274 IPR044597 GO:0003691
Mibi04g0453 275 SMART h15plus2 111 176 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi04g0453 275 MobiDBLite consensus disorder prediction 57 84 - -
Mibi04g0453 275 Pfam linker histone H1 and H5 family 115 174 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi04g0453 275 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 113 181 IPR005818 GO:0000786|GO:0003677|GO:0006334
Mibi04g0453 275 Coils Coil 225 255 - -
Mibi04g0453 275 FunFam Telomere repeat-binding factor 1 2 58 - -
Mibi04g0453 275 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
Mibi04g0453 275 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Mibi04g0453 275 SUPERFAMILY "Winged helix" DNA-binding domain 113 193 IPR036390 -
Mibi04g0453 275 CDD SANT_TRF 6 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0453 Mibi-ChrMibi04 8532483 8536012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0453 1 275 Single Myb Histone (SMH) Gene Family AT1G72740 43.816 2.06e-68 211