Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0452 ATGACTTCCACGGTAATTACCTATACCATGGTCGTCACGGGTCCCGGCGCCGACCAACTTATTATGGCCGGCAACTTCATCGGTTCTAAAGAACCTTCACCTCCTTGGCTAGTTGCAGAAGAAAATGTTGCAGGGAAAAGAGCACATGTTGCAGATCTGGAAAGCATGGAGAAATATGAACGCCGTGCTCCAAAAAAAGATGGTGGTATCAGAACATTGTCTGCCTCCTTGGGATTAACCAAACAAGAACAACAAAACCAACAGTCACATGACTTTACTTTGAATTGGTTTGAAGAGAAGGGAATTCCAGAAGTATTTGTGTTTTTGCTTCTTGATTTTGAGGTATTCTTAGTGAGTCTCACTGTTCATCCCATTCCCAATCTTACTTCTGAGCCTCTTCACTTCATCTGCAACTCTTGGGTTGATACATTCAACAGCACACAACTTACTCGTCTTTTCTTCATTAACAAGTCATACCTGCCTAGTCAAACACCAGGACTAGTGAGTTTTTACCGAGAAGGGGAGCTACAAGTTTTAAGAGGAGAAGCAGAAGGAGTTCAAATAGCCGATGGAGTTCGCAAGGAATGGGATAGAATCTATGATTATGCTACTTACAATGACTTGGGTGATGTTGATGCAAGTCCAGATCTTGCTCGTCCAACTCTTGGAGGATCCTCTCAATATCCCTACCCTCGTAGGCTAAGAACTGGAAGACCCCCATCAAAGACTGATCCGAGCACTGAGAGCAGACTGCCTGCAGACGAAGCCTTTTCGATCTATGTTCCAAGAGATGATCGATTTGGTGACCAGAAGTTGTTTGAGTTTGTGCAATATTTCCCCAAATCATCAATGAACCTCATGAAATCATATCTATCAGCGGAATTGGAGGCCTCAGGAAAAGAATTTGAAAGCTTTGAACAAGTACTTAAAATACTCTATCAACAAGGTTTTACCTTTAATGTGCCTAAAGCCGTACTTGATGCCATTGCTGAAAAGCTACCTATTCCAACTCCCCCAGACAATGGCAATCTACTATTAAAGTTTCCAATTCCTAGTGTCATTCAAGATAATCTAGATGGATGGATGACGGACGAAGAATTTGCAAGAGAGATGCTCGCTGGTGTGAATCCTGTTTCAATCCACCTCCTTCAAGAATTCCCCATAAAAAGTACGCTAGATACTAATCTCTACGGTGATCATACATCTACCATAACAAGAGAACACTTGGAGAAGAACATGAATGGGCTCACAGTTTATGAGGCTCTGAATTCCAAGAGATTATTCATATTAAATCACTATGATGCATTTATGCTATATTTAAGGAAGATAAACGAAACTTCTAGAAAGGCTTATGCAAGTAGAACAATCCTTTTCCTTCAAGATGATGGGACTTTGAAGCCACTTGCTATTGAGCTGAGCTTACCTCACCCTGATGGAGATCAATTTGGTGCTGTTAGTAAAGTGTATCTGCCTGAAACTGAAGGTGTTGAGGGCACCATTTGGCTATTGGCTAAAGCTTATGTTGTTGTAAATGACACAGGCTATCATCAACTAATTAGTCACTGGCTAAATACTCATGCTGTGATGGAGCCATTTTATATCGCAACACAAAGGCAGCTCAGTCAACTTCACCCTATTCATAAACTTCTTCATCCTCATTTTCATGACACCTTGTTCATCAATGCACTTGGTCGCCAAAACTTAATCTCTGCAGATGGAATCATAGAGGACTCATTCTTGCCTGGAAAATATTCTATGGAGATGTCATCTGTGGTTTACAAGAGTTGGAATTTCCTTGACCAAGCCCTACCAACAGATCTCATCAAGAGAGGAATGGCAGTAGAGGATCCAACTGCTCCTCATGGACTTCGCCTTGTGATAGAGGACTACCCTTATGCTGTAGATGGACTATTAATATGGGATGCTGTTAACACCTGGGTTCATGACTATGTCACTTATTACTATGAGTCAGATGAGATCCTTAAGCAGGATCCTGAGCTACAATCATGGTGGAAAGAAATAGTAGAAGTAGGACATGGTGACCTAAAAGATAAGGACTGGTGGCCTAAGATGCAGACACGTCAAGAGCTAATTCACTCTTGCACTATCATCGTATGGACAGCTTCAGCTCTTCATGCTGCTGTGAATTTTGGACAGTATCCTTATGGAGGATATATCCTGAACCGTCCTACTTTAAGTAGAAGGCTAATGCCTGAGAAGGGAACTGAAGAATATGAAGAGATGGTGAAGAATCCAGAGCTAGCTTTCTTAAAAACAATCACACCAAAGTTTGAGACACTTCTTGATCTTTCAATTATAGAGATATTGTCAAGCCATACAAGTGATGAGGTTTATCTTGGAACAAGGACTATTCCTTACTGGACTTCTGATAAGAAGGTTTTGGAGGATTTCAAGAAGTTTGGTGATACATTGGCTGAGATAGAGAAAAAATTGATAAGGAGGAATGAAGATGGGACACTGAAAAACAGGGTTGGGCCAGTGATGGTGCCTTACACTCTGCTCTATCCTAGCAGTGAACAAGGACTTACAGGCAGAGGAATTCCAAACAGTATCTCTATATGA 2583 0.4139 MTSTVITYTMVVTGPGADQLIMAGNFIGSKEPSPPWLVAEENVAGKRAHVADLESMEKYERRAPKKDGGIRTLSASLGLTKQEQQNQQSHDFTLNWFEEKGIPEVFVFLLLDFEVFLVSLTVHPIPNLTSEPLHFICNSWVDTFNSTQLTRLFFINKSYLPSQTPGLVSFYREGELQVLRGEAEGVQIADGVRKEWDRIYDYATYNDLGDVDASPDLARPTLGGSSQYPYPRRLRTGRPPSKTDPSTESRLPADEAFSIYVPRDDRFGDQKLFEFVQYFPKSSMNLMKSYLSAELEASGKEFESFEQVLKILYQQGFTFNVPKAVLDAIAEKLPIPTPPDNGNLLLKFPIPSVIQDNLDGWMTDEEFAREMLAGVNPVSIHLLQEFPIKSTLDTNLYGDHTSTITREHLEKNMNGLTVYEALNSKRLFILNHYDAFMLYLRKINETSRKAYASRTILFLQDDGTLKPLAIELSLPHPDGDQFGAVSKVYLPETEGVEGTIWLLAKAYVVVNDTGYHQLISHWLNTHAVMEPFYIATQRQLSQLHPIHKLLHPHFHDTLFINALGRQNLISADGIIEDSFLPGKYSMEMSSVVYKSWNFLDQALPTDLIKRGMAVEDPTAPHGLRLVIEDYPYAVDGLLIWDAVNTWVHDYVTYYYESDEILKQDPELQSWWKEIVEVGHGDLKDKDWWPKMQTRQELIHSCTIIVWTASALHAAVNFGQYPYGGYILNRPTLSRRLMPEKGTEEYEEMVKNPELAFLKTITPKFETLLDLSIIEILSSHTSDEVYLGTRTIPYWTSDKKVLEDFKKFGDTLAEIEKKLIRRNEDGTLKNRVGPVMVPYTLLYPSSEQGLTGRGIPNSISI 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0452 860 FunFam Lipoxygenase 495 859 - -
Mibi04g0452 860 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 158 860 IPR013819 GO:0016702|GO:0046872
Mibi04g0452 860 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 86 159 IPR036392 GO:0005515
Mibi04g0452 860 Gene3D - 359 493 - -
Mibi04g0452 860 PRINTS Lipoxygenase signature 498 515 IPR013819 GO:0016702|GO:0046872
Mibi04g0452 860 PRINTS Lipoxygenase signature 516 533 IPR013819 GO:0016702|GO:0046872
Mibi04g0452 860 PRINTS Lipoxygenase signature 536 556 IPR013819 GO:0016702|GO:0046872
Mibi04g0452 860 PANTHER LIPOXYGENASE 100 860 IPR000907 GO:0016702|GO:0034440|GO:0046872
Mibi04g0452 860 Gene3D - 494 859 - -
Mibi04g0452 860 SUPERFAMILY Lipoxigenase 160 860 IPR036226 -
Mibi04g0452 860 ProSitePatterns Lipoxygenases iron-binding region signature 2. 543 553 IPR020834 GO:0016702|GO:0046872
Mibi04g0452 860 Pfam Lipoxygenase 170 843 IPR013819 GO:0016702|GO:0046872
Mibi04g0452 860 MobiDBLite consensus disorder prediction 216 250 - -
Mibi04g0452 860 Gene3D PLAT/LH2 domain 43 159 - -
Mibi04g0452 860 Gene3D - 271 358 IPR027433 -
Mibi04g0452 860 FunFam Lipoxygenase 360 493 - -
Mibi04g0452 860 PRINTS Plant lipoxygenase signature 229 248 IPR001246 GO:0016491
Mibi04g0452 860 PRINTS Plant lipoxygenase signature 346 362 IPR001246 GO:0016491
Mibi04g0452 860 PRINTS Plant lipoxygenase signature 385 404 IPR001246 GO:0016491
Mibi04g0452 860 PRINTS Plant lipoxygenase signature 125 143 IPR001246 GO:0016491
Mibi04g0452 860 PRINTS Plant lipoxygenase signature 451 475 IPR001246 GO:0016491
Mibi04g0452 860 PRINTS Plant lipoxygenase signature 196 212 IPR001246 GO:0016491
Mibi04g0452 860 PRINTS Plant lipoxygenase signature 773 787 IPR001246 GO:0016491
Mibi04g0452 860 Gene3D - 160 270 - -
Mibi04g0452 860 ProSitePatterns Lipoxygenases iron-binding region signature 1. 516 530 IPR020833 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0452 Mibi-ChrMibi04 8512250 8518299 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0452 87 860 Acyl Lipid Metabolism Gene Families AT1G55020 56.338 0.0 877