Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0434 ATGGAAGAAGTTGAACTCAACGAAATAACAACTTGTGGCCAAATCAGCCTTCTTTATGAGGCTGCATACAATGGTGATGTGTCAATGCTTAATTCATTGATACAACAACGCCCACATATCTTGCACAAGACTTCACAAACTTCCTTCACAGAAACTCCTTTACACATATCATCTTTGCTTGGCCACCTTCAATTCACAAAGAAACTTGTCACTTACAAACCTAGTTTGGCTCTTGAGGTAGACTCCTCACGAATGACACCTCTCCATTTGGCTTCTGCTGAGGGTCACATCGACATCGTGAAGGAATTGCTAAAAGTTCACAATGAGCCGTGCTTGTTTCCTGATGAAGAAGGAAGAATTCCTTTGCACTATGCGGCTATGAGAGGTAGAACAGAGGTTGTGCAAGAGTTGATCAAAGTGAAGCCTGAATCTTTGAACTTTTGTGACAATGGCAAAACTGTTTTTCACTTGTGTGTCACTTACAACCATTTAGAGACTCTCAGAGCTTTGGTGGAATCAGAGTCTGGTATTACTGGTGAGCTTTTCAACTTTATAAGCTCTGATAATTCTGGAAACACCATTCTCCATCTGGCAGTCATGTTGAAGCGAGTTGAGGTAGTAGGCTATCTCTTGTCAATTCCAGAAATAAGAGAAATAGCTAAATTGAAGAACAATATGGGGTTTACAGCCCACAATATCTTGGAACAAAGTCCAAAAGACTTTAAAATATGTGAAATTCAACACATGCTGACAAAGGCCGAAAAGGATGGTGGAATTGAAATTAATCATCCAAACCTGCCCGCCAAACCGGCATCTAAAGACGTTGTCCCTCCTCGGAAAGGTGGTCGTTGGATTAAGATGTTTCATAACATTAGAAAATTTTTCGTTGAAATTTTTACTTGGATTGAACAATGGTGGATGCGTGAGGATCAATGGCTTAAAGAGATGAGAGGGAATTTGAGTTTGGTGTCTACCGTTATAGCAACTATTTCATTTCAAGCTTTGATTAATCCACCTGGTGGATTTTTTCAACAAGGCTTAGGATCTAAAGAAGACACCACCTCATTAAATGATGGCATCCTTGCCTGCATCAACTTACCTTATGATATTCAGTATTGCCCTGGACAAGCTTTGTCTTCATCAATTACGGAAAGTTATAAATTCAAGAACTATATATATTGCGTGACGGTCGCTTTTTTTTCATCACTTAGTGTCACACTCTTTCTGGTAAGTGGAATATTTCCTATGAAGAATAAAGCTGTGATATGGGTGCTAACAATAGGCATGTTTATCGTTCTCACAGCCCTTGCATCAGCGTACGCTGCTGCTATCGAGATTATAATCCCAGTTAATCTTTATGAGAATAACATTGATCGTACTCTGAATACAGTGTATGTGATATGGAATCGATTGCTTGGGGTGATAATAATGCTAATCACACTGCGCCTTTACATTTGGGTGATGAAGAAATGTGTCATGGGATTCAAGAAGTCAAAAAGTTGGGGGAGAGAACATGGATGGGGAAGCTTTCGGTTACTTTTTAGGATTGTTGTTATTTTTTTCATGTTTGTGATTTCTTCTGTCCTATTAGGAATATTAGTTTTAGTTTACTGGATTTTTCAAATATATAAGCCGTTTTGGCTCCTTGGTTAA 1653 0.389 MEEVELNEITTCGQISLLYEAAYNGDVSMLNSLIQQRPHILHKTSQTSFTETPLHISSLLGHLQFTKKLVTYKPSLALEVDSSRMTPLHLASAEGHIDIVKELLKVHNEPCLFPDEEGRIPLHYAAMRGRTEVVQELIKVKPESLNFCDNGKTVFHLCVTYNHLETLRALVESESGITGELFNFISSDNSGNTILHLAVMLKRVEVVGYLLSIPEIREIAKLKNNMGFTAHNILEQSPKDFKICEIQHMLTKAEKDGGIEINHPNLPAKPASKDVVPPRKGGRWIKMFHNIRKFFVEIFTWIEQWWMREDQWLKEMRGNLSLVSTVIATISFQALINPPGGFFQQGLGSKEDTTSLNDGILACINLPYDIQYCPGQALSSSITESYKFKNYIYCVTVAFFSSLSVTLFLVSGIFPMKNKAVIWVLTIGMFIVLTALASAYAAAIEIIIPVNLYENNIDRTLNTVYVIWNRLLGVIIMLITLRLYIWVMKKCVMGFKKSKSWGREHGWGSFRLLFRIVVIFFMFVISSVLLGILVLVYWIFQIYKPFWLLG 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0434 550 Pfam Ankyrin repeats (3 copies) 122 211 IPR002110 GO:0005515
Mibi04g0434 550 Pfam Ankyrin repeats (3 copies) 18 105 IPR002110 GO:0005515
Mibi04g0434 550 Gene3D - 2 237 IPR036770 -
Mibi04g0434 550 ProSiteProfiles Ankyrin repeat region circular profile. 117 139 - -
Mibi04g0434 550 ProSiteProfiles Ankyrin repeat region circular profile. 83 105 - -
Mibi04g0434 550 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 16 501 - -
Mibi04g0434 550 Pfam Domain of unknown function 311 346 IPR026961 -
Mibi04g0434 550 Pfam Domain of unknown function 382 444 IPR026961 -
Mibi04g0434 550 SUPERFAMILY Ankyrin repeat 12 233 IPR036770 -
Mibi04g0434 550 ProSiteProfiles Ankyrin repeat profile. 83 105 IPR002110 GO:0005515
Mibi04g0434 550 ProSiteProfiles Ankyrin repeat profile. 117 139 IPR002110 GO:0005515
Mibi04g0434 550 SMART ANK_2a 150 179 IPR002110 GO:0005515
Mibi04g0434 550 SMART ANK_2a 13 43 IPR002110 GO:0005515
Mibi04g0434 550 SMART ANK_2a 49 78 IPR002110 GO:0005515
Mibi04g0434 550 SMART ANK_2a 83 112 IPR002110 GO:0005515
Mibi04g0434 550 SMART ANK_2a 190 221 IPR002110 GO:0005515
Mibi04g0434 550 SMART ANK_2a 117 147 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0434 Mibi-ChrMibi04 8026249 8028554 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0434 25 399 Miscellaneous Gene Families AT4G10720 26.234 2.68e-31 124