Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0429 ATGAGAACTTCCCATCATCATGAAGAGGAGATATTGAGACATCTTTATGAAGCATCACGCAGAGGATCCATATCAACTTTGAACTCAATCTTACAACAAGAACCATTAATCCTCCACAAGATCTCACAAAGTGGCTTCTCAGAAACTCCTTTACACATATCAGCTTTGCTTGGCCACCTTGACTTCACCAAAGCACTTCTTACATATAATCCCAAACTAGCCATTGAGGTTGACTCTTGCCAAAATACACCTCTCCACTTGGCTTCTGTAGAAGGTCACATCGATGTTGTGAAGGAACTGATTAAGGTTAATAACAAGCCATGCTTGCTTCCTAATGAAGAGGGCAAGATTCCTTTGCACTATGCAGTTATGAGAGGGAGAATTGAAGTTGTGAGAGAGTTGGTGAAGGCAAAGCCTGAGTCTATGAGCTTTCTTGATAATGGCAACAATGTTTTTCACATGTGTGTGATACACAATCATTTGGAGACTCTCAAAGCTTTGGTGGAATTGGAACTTGTCATTTCTGGGAAGCTTCTTAACTTGACAAGTTCTGATGGAGTGGGCAACACCGTTTTCCATTTAGCAGTCTCATTCAAACAAGTTGAGACTATAAGGTACCTCGTATCAATCCCAAAAGCAATAGAACTGGCGAGCTTGCAAAACGACATGGGTCTCACTGCCTATGACATTCTTAAAAGCAGCCCAAAAGATTTCAAAACCCTGGAAATACAAGTCATGATGATGGAATATTCTGGAATCAGAACTGAAAATAACAGAATATTCCAAACTCATTCACACTCTCCATCACCACAAGTTGCAAGACCTCGAATTAGAAAGAAGAAGAACAGAAATTGTTTGATGAGGGTTTTGAAATGGATTGGAGGTTGGTTTAGACACAAAGGTGATTGGATAGAAGAAATGAGAGGAAATTTGAGTTTAGTGTCTACCGTTATAGCCACCATAACATTTCAATCATTAATAAATCCACCTGGTGGCTCCATTCAACAAGGTTTAGCTCAAGGCTCACCCAATTTTGCCCTAAATTGCACCATCTTTAATAATGAATCCTATTGTCCAGGTGAAGCAGTCTCATCTTTTCATTTTGAAAGGGAGTTTTTGCAGTATGTAATTTTCAATACCATATCTTTCATCTCATCACTTAGTGTCACACTCTTGCTTGTAAGTGGTGTTCCTCTGAAGAACAAACCTTTGATATGGCTTCTATCCATAGGCATGTGTATCACTCTAACATTCCTAGCTCTTGCCTACTTACGTGCCCTTAGAATGGTGATGCCAGACCATCTTTGGGATAATTACGCCGCTTCAACCACCATATATGCGTCTATTTATGCCTGGCTCGGATTGCTTACGGTGATTATAGTGTTAATCACACTGCGCCTTATAATTTGGATCATCAAGAAATGTGTCAGATCAGTTAGAAAGTTGTTCACATGTGGAAATAGGGAAAGTTGA 1473 0.3978 MRTSHHHEEEILRHLYEASRRGSISTLNSILQQEPLILHKISQSGFSETPLHISALLGHLDFTKALLTYNPKLAIEVDSCQNTPLHLASVEGHIDVVKELIKVNNKPCLLPNEEGKIPLHYAVMRGRIEVVRELVKAKPESMSFLDNGNNVFHMCVIHNHLETLKALVELELVISGKLLNLTSSDGVGNTVFHLAVSFKQVETIRYLVSIPKAIELASLQNDMGLTAYDILKSSPKDFKTLEIQVMMMEYSGIRTENNRIFQTHSHSPSPQVARPRIRKKKNRNCLMRVLKWIGGWFRHKGDWIEEMRGNLSLVSTVIATITFQSLINPPGGSIQQGLAQGSPNFALNCTIFNNESYCPGEAVSSFHFEREFLQYVIFNTISFISSLSVTLLLVSGVPLKNKPLIWLLSIGMCITLTFLALAYLRALRMVMPDHLWDNYAASTTIYASIYAWLGLLTVIIVLITLRLIIWIIKKCVRSVRKLFTCGNRES 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0429 490 Pfam Ankyrin repeats (3 copies) 18 102 IPR002110 GO:0005515
Mibi04g0429 490 Pfam Ankyrin repeats (3 copies) 111 169 IPR002110 GO:0005515
Mibi04g0429 490 ProSiteProfiles Ankyrin repeat region circular profile. 114 136 - -
Mibi04g0429 490 Pfam Domain of unknown function 302 427 IPR026961 -
Mibi04g0429 490 SMART ANK_2a 80 109 IPR002110 GO:0005515
Mibi04g0429 490 SMART ANK_2a 46 75 IPR002110 GO:0005515
Mibi04g0429 490 SMART ANK_2a 114 144 IPR002110 GO:0005515
Mibi04g0429 490 SMART ANK_2a 187 216 IPR002110 GO:0005515
Mibi04g0429 490 SMART ANK_2a 147 176 IPR002110 GO:0005515
Mibi04g0429 490 Gene3D - 10 243 IPR036770 -
Mibi04g0429 490 ProSiteProfiles Ankyrin repeat profile. 80 102 IPR002110 GO:0005515
Mibi04g0429 490 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 15 467 - -
Mibi04g0429 490 SUPERFAMILY Ankyrin repeat 15 230 IPR036770 -
Mibi04g0429 490 ProSiteProfiles Ankyrin repeat region circular profile. 80 102 - -
Mibi04g0429 490 ProSiteProfiles Ankyrin repeat profile. 114 136 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0429 Mibi-ChrMibi04 7738452 7740829 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0429 13 470 Miscellaneous Gene Families AT5G15500 25.424 6.58e-32 125