Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0425 ATGAGCTCACCCCGGTATTGGCAAGCCCAACTCAGTATTTCCGCTAGGCATCTATATAAAGGGTACCAAACAGTGAAGCATTATGTAAAGCTAGAGATAAAACTCATCAACGTAATGGACGGTGAAATGAATGTCCAAATTGATGACAGTGATCTCTATCTGGCAGCATTTCTTGGGGATGAACAAACTTTGGGGCAACGCCTAACAGCACAGCCAGACACAGAAACAAATATCCTTGAAAACATTTTACGCACATCAGCACTGCTTGGTCATGTTCGATTCACGGAGGTTCTTCTCGATCATAATACCGACATCGCCTCTGGAGCGGATTCTTGTGGAAGAACAGCCCTACACTTGGCTTCTTCAGAGGGTAACTTGCAGATCGTGACGAGACTGCTGCAATTAAATAATGTAAATGAGCTATGCTGGGCTCGTGATGGAGAAGAAAGAATTCCGCTGCACTATGCAGCTATGAGAGGCAGAACTGAGGTTGTGCAAGAGTTGATCATGGCATTCCCAGCTTCTCTAGGTCTTGGTGATGCAAAAGAAAGAACTGTTTTTCATTTATGTGTCACATACAGCCATTTAACTACTCTCGAAACTTTGGTGAAATTGGACTATGCCACTGTCAATGTTACTGAAGGCGAGCCTCGGCCTCGTCCTCACATCTTTACGCGTCCTGATCGGGCTGGGGATACCATCCTCCATTTAGCTTTGAAGTTCAAGCGAGTTGAGGTGGTGAGCTATCTCCTGTCAATTCCAGAAATAAGACGAATAGCAAACTTGGAGAATAAAATAGGCCTTACAGCCCACGATATCTTGGAAGAAAAAAGTCCAAAACACTTGAAAATATGTGAAATGCATCTCATGTTGTTGACAATGGTCAAAAGGCAAGGAAATTTTTGTACGAAAATTTTTAGATATTGGTGGTGGCATGGGGATGACTGGATTAAAGAGATGAGGGGGAATCTGAGTCTGGTGTCTACTGTTATAGCAACTATAACTTTTCAAGCTTTGATTAATCCACCTGGTGGCTTTATTCAACAAGGTTTAGTATCTAAGGAAAATACCACCTCATCAATTCAAGTCCCCAATAATGTCACTTCATCTTATGACCTCCTTAGTTGCGGTCGCCTTCATGATGGTAATGAGTATTGTCCTGGACAAGCTATGGCTTTATCCCCACATCTCCATGACCATTATAAGGATTATTTACTTTTCGTCACGATCTCTTTTTTTTCATCACTTAGTGTCACCCTCATGCTTGTGAGTGGAATATTTCCTATGAAGAATAAATTTGTGATATGGATGCTATCAATAGGCATGTGGATCAGTCTCACATCCCTTGCAGCAGCATACATTCTAGCCCTTTATATTATAATCCCATCTCATCTTTTGGAAGGGAAATTATTTGTGCACATCGATGAAGTGACGTATTGGGTCTGGTTTAGATTGCTTGGGGTAATAGTAGTGCTAATCACACTGCGCTTTTTTATTTGGGCGTCAAAGAAATGTGCCAAGATATTGAAGAAGTCAAGAAGCTGGGTGAGAGATAATGGATATCCCGAATATCTTTTTGTGCTTCTTAGGATTATAGTTATTTTTGTAACATTAGTGATCTTTTCTATCCAAATATTAATAGTAATTTTAGTTTTTTTTCGTTTTGGAAAGTAA 1674 0.4056 MSSPRYWQAQLSISARHLYKGYQTVKHYVKLEIKLINVMDGEMNVQIDDSDLYLAAFLGDEQTLGQRLTAQPDTETNILENILRTSALLGHVRFTEVLLDHNTDIASGADSCGRTALHLASSEGNLQIVTRLLQLNNVNELCWARDGEERIPLHYAAMRGRTEVVQELIMAFPASLGLGDAKERTVFHLCVTYSHLTTLETLVKLDYATVNVTEGEPRPRPHIFTRPDRAGDTILHLALKFKRVEVVSYLLSIPEIRRIANLENKIGLTAHDILEEKSPKHLKICEMHLMLLTMVKRQGNFCTKIFRYWWWHGDDWIKEMRGNLSLVSTVIATITFQALINPPGGFIQQGLVSKENTTSSIQVPNNVTSSYDLLSCGRLHDGNEYCPGQAMALSPHLHDHYKDYLLFVTISFFSSLSVTLMLVSGIFPMKNKFVIWMLSIGMWISLTSLAAAYILALYIIIPSHLLEGKLFVHIDEVTYWVWFRLLGVIVVLITLRFFIWASKKCAKILKKSRSWVRDNGYPEYLFVLLRIIVIFVTLVIFSIQILIVILVFFRFGK 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0425 557 ProSiteProfiles Ankyrin repeat profile. 112 134 IPR002110 GO:0005515
Mibi04g0425 557 ProSiteProfiles Ankyrin repeat profile. 148 169 IPR002110 GO:0005515
Mibi04g0425 557 Pfam Domain of unknown function 396 459 IPR026961 -
Mibi04g0425 557 Pfam Domain of unknown function 315 351 IPR026961 -
Mibi04g0425 557 SMART ANK_2a 230 258 IPR002110 GO:0005515
Mibi04g0425 557 SMART ANK_2a 78 107 IPR002110 GO:0005515
Mibi04g0425 557 SMART ANK_2a 182 212 IPR002110 GO:0005515
Mibi04g0425 557 SMART ANK_2a 112 140 IPR002110 GO:0005515
Mibi04g0425 557 SMART ANK_2a 148 178 IPR002110 GO:0005515
Mibi04g0425 557 Pfam Ankyrin repeats (3 copies) 139 213 IPR002110 GO:0005515
Mibi04g0425 557 Pfam Ankyrin repeats (3 copies) 53 135 IPR002110 GO:0005515
Mibi04g0425 557 ProSiteProfiles Ankyrin repeat region circular profile. 148 169 - -
Mibi04g0425 557 SUPERFAMILY Ankyrin repeat 50 270 IPR036770 -
Mibi04g0425 557 ProSiteProfiles Ankyrin repeat region circular profile. 112 134 - -
Mibi04g0425 557 Gene3D - 48 288 IPR036770 -
Mibi04g0425 557 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 86 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0425 Mibi-ChrMibi04 7438323 7442316 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0425 83 517 Miscellaneous Gene Families AT3G12360 23.467 1.26e-19 90.5