Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0420 ATGTTTGAGCTTCAGAGAATTGGTATTTTTAACAGGTATTGGATGAGCCATAGTGGATTACAAATGAAGTGTTCATGCAAGAAAGATTTTGGCCTATGTTCTGCTCATTCAACATCCCCTGACGTTCTTGGATGCTCATCATGGAAAACTTCATCTGGATTTCATGGACAAGAATCACCTATGTCCAAAAGTTTGAGCTTAAAAATTGGAGCTCTCCCACAAAAATGTCTTAATTCTAAGCCGTTTAGTTTTCCATTGCAAGAAGTGGACTCATCTTCATCCCAACCATCAGATCAATATTATCCTAAAGGTGTTTCGGTGAACTCAGGACCGTTGGAGGTAAAGCCTTTTGGAGGTCTCATCTGGTCATCTGTAGCGAGGCAGAATTTTTTCTTCCATCCTTCCTTTGTGGATCATAACAAATCAATTATTCATCAAGCTCAACTGATGGGAATGGCTCCACTCCGGGTTCCACTTCCACTTGACTTCACAGAAGAAGAGCCTGTATTTGTGAATGCAAAACAATATCATGCAATTCTGAGGCGAAGGCAGTATCGATCAAAACTCGAATCACAAAACAAGCTTAACAAAACTCGGAAACCATATCTTCATGAGTCTCGTCATCTACATGCACTGAAGAGAGCCAGAGGTTCTGGTGGACGCTTTCTTAACACCAAAAAGCTCCAACAATCATCATCATCAGAATTACCTCCAGCAAGCCAATGTGTACGGACATGGAATCATCTGACTGTTACTTCACCAGTATCTAAATTTCTCAGGTTAGAAAATTGCAGAGATTGTGCATCCACCACCACCACTTGTTCTCACTTGACAAGTGCTTCTAACAGTGAAAGCGTCTTCCAGCAGCAACAAGAGTCAGATTTGAGATTGTGTGGAAAATATCCTTCTTCTCACATTGGAAGCAATATGCAGAGTTTCTCAGTTGATCATATGAGTGGTGATGATAATCAGCATCCTTTATCTGTCTTCATGTGA 996 0.4076 MFELQRIGIFNRYWMSHSGLQMKCSCKKDFGLCSAHSTSPDVLGCSSWKTSSGFHGQESPMSKSLSLKIGALPQKCLNSKPFSFPLQEVDSSSSQPSDQYYPKGVSVNSGPLEVKPFGGLIWSSVARQNFFFHPSFVDHNKSIIHQAQLMGMAPLRVPLPLDFTEEEPVFVNAKQYHAILRRRQYRSKLESQNKLNKTRKPYLHESRHLHALKRARGSGGRFLNTKKLQQSSSSELPPASQCVRTWNHLTVTSPVSKFLRLENCRDCASTTTTCSHLTSASNSESVFQQQQESDLRLCGKYPSSHIGSNMQSFSVDHMSGDDNQHPLSVFM 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0420 331 Gene3D - 165 226 - -
Mibi04g0420 331 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 82 296 IPR001289 GO:0003700|GO:0006355
Mibi04g0420 331 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 167 222 IPR001289 GO:0003700|GO:0006355
Mibi04g0420 331 ProSiteProfiles NF-YA/HAP2 family profile. 165 225 IPR001289 GO:0003700|GO:0006355
Mibi04g0420 331 SMART cbf3 164 225 IPR001289 GO:0003700|GO:0006355
Mibi04g0420 331 PRINTS CCAAT-binding transcription factor subunit B signature 168 190 IPR001289 GO:0003700|GO:0006355
Mibi04g0420 331 PRINTS CCAAT-binding transcription factor subunit B signature 199 222 IPR001289 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0420 Mibi-ChrMibi04 7344986 7348276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0420 27 315 CCAAT-HAP2 Transcription Factor Family AT1G17590 37.537 2.06e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Mibi04g0420 CBFB_NFYA 4.8e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1453 11 34112815 34118967 Mibi04g0420 04 7344986 7348276 CCT
Mibi04g0420 04 7344986 7348276 Mibi04g0420 04 7344986 7348276 ECH