Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0400 ATGTTGACCTGCATTGCGTGTTCCAAGCAGCTTAATGACAAGAGATCTCTTCCTTTACAAGATGAACATGAAGAAGAAGCTGTGGATACTCCCAGCACTAAGCAGGCCATTAAGGCCCTCACCGCACAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCATACAAAAATTGCAAGCCATGTTCAGGATCTTCAAATGGTAATAGGAACCAGAACTATGCAGATTCTGATATGGCTTCAGAATCAGCGAGATTTCACTGGGCGTACAAGAGGACTGGGAGCTCCAACTCAACCCCTAGGCTTTGGGGAAAGGAGATGGCAGAGAGACTGAAAGGGCTCTCTAGTGGTGAAGGAACGCCGGCGTCAGTGAGTGGCCGGACTGAGTCGGTGGTGTTCATGGAGGAAGACGAGCCCAAGGAATGGATTGCTCAAGTTGAGCCTGGTGTGCTTATCACTTTTGTTTCATTGCCTCAAGGTGGGAATGATCTGAAACGAATACGGTTCAGCCGGGAAATGTTTAATAAATGGCAAGCTCAAAGGTGGTGGGCTGAGAATTATGACAAGGTCATGGAGTTATACAATGTTCAGAGGTTCAATGAACAAGTGGGTCCATTTCCAACCCCGCCGAGATCCGAAGATGAGAGCTCGAAGATTGAATCTGTTAGGGACAGCCCTGTCACACCTCCTCTCAACAAAGAGCGTCCACCGCACCATCTTCTTCACCGTCAATTGGGAATGGGATACTCTTCGTCGGATTCACTGGATCATCATCATACAATGCAACAACGCCCGTGCTATGAAACAAGCGGCTTAGCTTCAACGCCTAAACTTTCTGGCATCAGTGGGGTGAAGACTGAAACATCATCTTTAGATGGTTCTGTGAGGACTAGTTCTTCAAGAGAGGGAGATCAATCAGGTGAGCTTTCACTCAGCAATGCCAGTGATATGGAGACTGAATGGGTTGAACAGGATGAACCAGGAGTTTACATCACCATCAGAGCCCTGCCAGGAGGAGCCAGAGAACTCAGGCGTGTCCGGTTCAGCCGAGAAAGGTTTGGGGAAATGCACGCGAGGTTGTGGTGGGAAGAGAATCGGGCTAGGATACAGGAGCAATATTTGTGA 1122 0.4875 MLTCIACSKQLNDKRSLPLQDEHEEEAVDTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNRNQNYADSDMASESARFHWAYKRTGSSNSTPRLWGKEMAERLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWIAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNEQVGPFPTPPRSEDESSKIESVRDSPVTPPLNKERPPHHLLHRQLGMGYSSSDSLDHHHTMQQRPCYETSGLASTPKLSGISGVKTETSSLDGSVRTSSSREGDQSGELSLSNASDMETEWVEQDEPGVYITIRALPGGARELRRVRFSRERFGEMHARLWWEENRARIQEQYL 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0400 373 Pfam Transcription factor regulating root and shoot growth via Pin3 139 193 IPR013591 -
Mibi04g0400 373 Pfam Transcription factor regulating root and shoot growth via Pin3 317 372 IPR013591 -
Mibi04g0400 373 ProSiteProfiles BRX domain profile. 318 373 IPR013591 -
Mibi04g0400 373 Pfam Transcription factor BRX N-terminal domain 25 61 IPR027988 -
Mibi04g0400 373 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 373 IPR044532 -
Mibi04g0400 373 MobiDBLite consensus disorder prediction 200 317 - -
Mibi04g0400 373 MobiDBLite consensus disorder prediction 263 317 - -
Mibi04g0400 373 ProSiteProfiles BRX domain profile. 139 194 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0400 Mibi-ChrMibi04 6913878 6916978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0400 1 373 Major Intrinsic Protein MIP AT1G31880 47.815 4.36e-102 304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0400 04 6913878 6916978 Mibi04g0400 04 6913878 6916978 ECH