Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0392 ATGGGAAGAAGTCCATGCTGTGCAAAGGAAGGTTTGAATAGAGGAGCATGGACAGCCATTGAAGACAAGATTCTCACTGACTACATTAAGATTCATGGCGAAGGAAAATGGCGAAACCTTCCCAAAAGAGCAGGCCTCAAGAGATGTGGGAAGAGTTGTAGGCTGAGATGGTTAAATTACCTGAGACCTGACATTAAAAGAGGAAATATTACTCGTGACGAGGAGGATCTCATTATCAGGCTTCACAAACTACTGGGAAACAGGTGGTCTTTAATAGCTGGACGACTACCAGGACGAACAGACAATGAAATAAAGAATTATTGGAACACAAACATAGGAAAGAAGCTTCAAAACAATGGTAACTCAAAAACAAAGCCGTCCCCTACTTCAAGTGGCTCGCCGAGCCGAGCCAGGCAAGACAAAGACATTATTGACTCCGAACCGGACCCACAAAAAGGGCCCGGTTCATGCCTGGTTCGAACCAAAGCAACAAGGTGCACCAAAGTGATAGTAATCAGAGAAGTCCAACCATTACAGGGAGTACCATATTTGACCATTCCTCATGATGACGAAGACATGAAAGTTAGGTGTGATCATCATGATGATGAGAAAAAAATGGAGGCACCATTACCATCTTTTCTAGATTCTGAGGCAAATAATGAAGATGATGATGATGATGATGATGATGATAATAATAACAATAACATGGCGTTGGATTTCATGGGGGATTTTGAAATGGACGAGGGATTCTTTTCAGATCTTCTGAATATGGATATATCCGAACCGACTTGTTTTGATCAGAACAAAGAAGTCCAAGAAGACAAGAGTAACACAAGCACTATTAGTGAACAAGGTTGTCATCAACATTTGTCTTCTTCACCGGCAGTATGTAATGACACCCATAACTTGAATAATAATAATAATGTCTCAGAGGATTCCTTTCATGATTCTGAGAATTTTCAGTCAATGTCAGCTTTAATGGAGAATGAATTTGATTGGCTTTGA 1005 0.406 MGRSPCCAKEGLNRGAWTAIEDKILTDYIKIHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNITRDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNIGKKLQNNGNSKTKPSPTSSGSPSRARQDKDIIDSEPDPQKGPGSCLVRTKATRCTKVIVIREVQPLQGVPYLTIPHDDEDMKVRCDHHDDEKKMEAPLPSFLDSEANNEDDDDDDDDDNNNNNMALDFMGDFEMDEGFFSDLLNMDISEPTCFDQNKEVQEDKSNTSTISEQGCHQHLSSSPAVCNDTHNLNNNNNVSEDSFHDSENFQSMSALMENEFDWL 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0392 334 Gene3D - 14 66 - -
Mibi04g0392 334 MobiDBLite consensus disorder prediction 274 315 - -
Mibi04g0392 334 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 255 - -
Mibi04g0392 334 MobiDBLite consensus disorder prediction 200 238 - -
Mibi04g0392 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Mibi04g0392 334 Gene3D - 70 143 - -
Mibi04g0392 334 SMART sant 13 63 IPR001005 -
Mibi04g0392 334 SMART sant 66 114 IPR001005 -
Mibi04g0392 334 MobiDBLite consensus disorder prediction 112 158 - -
Mibi04g0392 334 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Mibi04g0392 334 MobiDBLite consensus disorder prediction 270 315 - -
Mibi04g0392 334 CDD SANT 71 112 IPR001005 -
Mibi04g0392 334 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Mibi04g0392 334 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Mibi04g0392 334 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Mibi04g0392 334 FunFam MYB-related transcription factor 13 66 - -
Mibi04g0392 334 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Mibi04g0392 334 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Mibi04g0392 334 MobiDBLite consensus disorder prediction 112 137 - -
Mibi04g0392 334 CDD SANT 16 61 IPR001005 -
Mibi04g0392 334 MobiDBLite consensus disorder prediction 217 233 - -
Mibi04g0392 334 FunFam Transcription factor TT2 70 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0392 Mibi-ChrMibi04 6818890 6821098 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0392 1 215 MYB Transcription Factor Family AT4G38620 49.772 7.65e-63 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi04g0392 Myb_DNA-binding 4.8e-13 CL0123