Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0389 ATGGCTTGTAGGAGTGATGGTAGTGATAGCAAAGTGAAGAACGTAGCTGTCAGCAAAGGATCTTGGACACCAGAGGAAGATAGGAAACTAGCTGAAGTTATTGCAGTTCATGGGGCCAAGAAGTGGAAGTCCATTGCTGCAAAAGCTGGGCTTACTCGTAGTGGTAAGAGTTGTAGGTTAAGATGGTTGAACTATCTTAGACCCAACATCAAAAGAGGAAACATATCAGAGCAAGAAGAGGATTTGATACTTCGACTTCACAAACTCCTTGGAAACAGATGGTCATTAATAGCGGGAAGGCTGCCGGGAAGAACAGACAATGAGATAAAGAATTATTGGAATTCTCACTTGTGCAAGAAGATAAAACAGAGTGATCAGCAGCAATCAAGTGGGAGTTCAACAAGACATCAAGAGATCAAACAAGCATTTACTGATGAAGAAGACACATCAAAAGAATTCAACTTTGATGGTAATGTGGATTTTGGGTTCTTGGACTTGTCCAATAATAGTAATAATGATGAAGAAGGTCATCAATTGAATCTGGAGTGGGTTAATCAATTCCTTGAACTAGACGAGGCCACTCTTGGACTCTTCTCACAATAA 603 0.4046 MACRSDGSDSKVKNVAVSKGSWTPEEDRKLAEVIAVHGAKKWKSIAAKAGLTRSGKSCRLRWLNYLRPNIKRGNISEQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKIKQSDQQQSSGSSTRHQEIKQAFTDEEDTSKEFNFDGNVDFGFLDLSNNSNNDEEGHQLNLEWVNQFLELDEATLGLFSQ 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0389 200 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Mibi04g0389 200 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 10 165 - -
Mibi04g0389 200 Gene3D - 76 148 - -
Mibi04g0389 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 121 IPR017930 -
Mibi04g0389 200 FunFam Transcription factor TT2 75 147 - -
Mibi04g0389 200 Gene3D - 19 71 - -
Mibi04g0389 200 CDD SANT 76 117 IPR001005 -
Mibi04g0389 200 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Mibi04g0389 200 Pfam Myb-like DNA-binding domain 72 117 IPR001005 -
Mibi04g0389 200 CDD SANT 21 66 IPR001005 -
Mibi04g0389 200 SMART sant 71 119 IPR001005 -
Mibi04g0389 200 SMART sant 18 68 IPR001005 -
Mibi04g0389 200 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mibi04g0389 200 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 70 IPR017930 -
Mibi04g0389 200 SUPERFAMILY Homeodomain-like 18 113 IPR009057 -
Mibi04g0389 200 FunFam MYB-related transcription factor 18 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0389 Mibi-ChrMibi04 6774382 6775402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0389 1 153 MYB Transcription Factor Family AT5G52600 52.564 6.49e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi04g0389 Myb_DNA-binding 6e-19 CL0123