Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0388 ATGACAAGTGTCACTTACTCGCCCTCTTTTTCAAGCACATTGCATATATATAACTGGCAGAAACAAACAATGGCTTCTGAGAGTGATAATTGTAATAAGAGGAAAGTGAAGGCAGTTGGAGCCATGTCAAATGTGCCTCTTAGTAAAGCAGCATGGACATCAGAAGAAGACAAGAAACTTGCTGAGATTATTGCAGTTCATGGGGCAAAAAGGTGGGAGTCTATTGCAACCAAAGCAGGTCTTAATCGGTGTGGTAAGAGTTGTAGGTTGAGATGGTTGAACTATCTCAGACCCAACATCAAGAGGGGCAACATATCAGACCAAGAAGAGGATTTGATTCTTCGCCTTCATAAACTCCTTGGCAATAGATGGTCTTTAATTGCTGGGAGATTACCAGGGCGAACAGATAATGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAGATTAAGCAGAAGGAGAAGCACTCAAGTGGGAGTTCAACAAGACAAGAGAACCAACAAAAGATGGTGGTTGTAGAACACAAAATTCCTAAAGAAGAAGAAGAAAAAGCTAAGCAAATCAGAGAAGATATTTTTTCAACTACTGAGGAAGCTGAAGAAGACTCATCATCAAAACACAGTAGTTTTGATGTGGACGGGTTCTTTGATTTTTCCGTAGAGGAAGAAGAAGGTCCGTGGAATCTGGAGTGGGTTAATCAGTTCTTGGAACTTGATGATACAAACCTTGGACTCTTCTCACAATAA 750 0.4013 MTSVTYSPSFSSTLHIYNWQKQTMASESDNCNKRKVKAVGAMSNVPLSKAAWTSEEDKKLAEIIAVHGAKRWESIATKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQKEKHSSGSSTRQENQQKMVVVEHKIPKEEEEKAKQIREDIFSTTEEAEEDSSSKHSSFDVDGFFDFSVEEEEGPWNLEWVNQFLELDDTNLGLFSQ 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0388 249 CDD SANT 51 96 IPR001005 -
Mibi04g0388 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 96 IPR017930 -
Mibi04g0388 249 Gene3D - 50 101 - -
Mibi04g0388 249 MobiDBLite consensus disorder prediction 170 209 - -
Mibi04g0388 249 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 43 206 - -
Mibi04g0388 249 SUPERFAMILY Homeodomain-like 47 143 IPR009057 -
Mibi04g0388 249 MobiDBLite consensus disorder prediction 150 212 - -
Mibi04g0388 249 FunFam MYB-related transcription factor 48 101 - -
Mibi04g0388 249 Pfam Myb-like DNA-binding domain 102 147 IPR001005 -
Mibi04g0388 249 Pfam Myb-like DNA-binding domain 51 96 IPR001005 -
Mibi04g0388 249 ProSiteProfiles Myb-like domain profile. 44 96 IPR001005 -
Mibi04g0388 249 FunFam Transcription factor TT2 105 176 - -
Mibi04g0388 249 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Mibi04g0388 249 Gene3D - 105 190 - -
Mibi04g0388 249 SMART sant 101 149 IPR001005 -
Mibi04g0388 249 SMART sant 48 98 IPR001005 -
Mibi04g0388 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 151 IPR017930 -
Mibi04g0388 249 CDD SANT 106 147 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0388 Mibi-ChrMibi04 6756713 6758181 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0388 49 151 MYB Transcription Factor Family AT5G40330 69.903 4.05e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi04g0388 Myb_DNA-binding 1.4e-16 CL0123