Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0387 ATGGCTTCTGAGGGTGATAATTGTAATAAGAGGAAAGTGAAGGCAGTTAAACCTCTGCCAAATGTGCCTCTTACTAAAGCAGCGTGGACATCAGAAGAAGATAGGAAACTAGCTGAGGTTATTGCAGTTCATGGAGCTAAAAGGTGGAAGTCCATTGCATCCAAAGCAGGTCTTAATCGGTGTGGTAAGAGTTGTAGGTTGAGATGGTTGAACTATCTCAGACCCAACATCAAGAGGGGAAACATATCAGACCAAGAAGAGGATTTGATTCTTCGCCTTCATAAACTCCTTGGAAATAGGTGGTCTTTAATTGCTGGGAGGTTACCTGGACGAACAGACAATGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAGATTAGGCAGAAGGAGAAGCACTCAAGTGGGAGTTCAACAGGACAAGAGAACCAACAAAAGATGGTGGTTGTAGAACACAAAATTCCTGAAAAAGAAGTAGAAGAAGAAAAAGCTAAGCAAATTAGAGAAGATATTTTTTCAACTAACGAGGAAGATGAAGAAGACTCATCATCAAAACACAGTAGTTTTGATGTGGACGGGTTCTTCGATTTTTCCGTAGAGGAAGAAGAAGGTCCGTCGAATCTGGAGTGGGTTAATCAGTTCTTTGAATTTGATGATACAACTCTTGGACTCTTTTCACAATAA 687 0.4017 MASEGDNCNKRKVKAVKPLPNVPLTKAAWTSEEDRKLAEVIAVHGAKRWKSIASKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKIRQKEKHSSGSSTGQENQQKMVVVEHKIPEKEVEEEKAKQIREDIFSTNEEDEEDSSSKHSSFDVDGFFDFSVEEEEGPSNLEWVNQFFEFDDTTLGLFSQ 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0387 228 Gene3D - 82 155 - -
Mibi04g0387 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 74 128 IPR017930 -
Mibi04g0387 228 SMART sant 78 126 IPR001005 -
Mibi04g0387 228 SMART sant 25 75 IPR001005 -
Mibi04g0387 228 ProSiteProfiles Myb-like domain profile. 21 73 IPR001005 -
Mibi04g0387 228 Pfam Myb-like DNA-binding domain 28 73 IPR001005 -
Mibi04g0387 228 Pfam Myb-like DNA-binding domain 79 124 IPR001005 -
Mibi04g0387 228 MobiDBLite consensus disorder prediction 150 188 - -
Mibi04g0387 228 CDD SANT 83 124 IPR001005 -
Mibi04g0387 228 Gene3D - 27 78 - -
Mibi04g0387 228 FunFam MYB-related transcription factor 25 78 - -
Mibi04g0387 228 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Mibi04g0387 228 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 22 186 - -
Mibi04g0387 228 MobiDBLite consensus disorder prediction 127 191 - -
Mibi04g0387 228 CDD SANT 28 73 IPR001005 -
Mibi04g0387 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 21 73 IPR017930 -
Mibi04g0387 228 SUPERFAMILY Homeodomain-like 24 120 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0387 Mibi-ChrMibi04 6705130 6707098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0387 26 151 MYB Transcription Factor Family AT5G40330 59.375 1.21e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi04g0387 Myb_DNA-binding 3.7e-17 CL0123