Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0386 ATGGGCGATTGGATGGGGTTTTCTCTGACTCCACACTTGAGGATTGATGAAGTGTATGGGAATGGCAGAGAAAACCAAGAAGAAAACCATGGAGGCTGTCCTTCTTCTCATCCTCCTCGCTTGTCGGTTATGCCTTTAAGATCAGATGGTTCTCTCTGTGTTTCTGACCCTTTTGGGCACTCTTCTGGTGCACCTCAAGAATGGAGGTATGATAATGGAGTGGTAGCAGGAGGAGGAAGCTCCAATAATGAAGAAGGTCCAAAGCTTGAAGATTTCTTGGGTTGTTACTCAAACTCTTCTGATATTGCTGAAACCAAAGTGTATTGCCAAGACCAAGACCAGAATCAGAACAGTATTTCCAGCAGAATTAATGTGAATGTGGCCCCAAGTTGCTTCAGCAACAACACTGAGATAGAAGCTAATAATCATGGGGAAAATTTCACAAACCCTCCTCCTGCTTCCTTAATCCAATCTTTTCATGCATATAATAATAATGATGATGGAAACCAGCGAGGTGTGATCCCAAATAACAATAATGGCATGTACAAGTCCTGGTTGGCTTCTCAATCTCAATCTTCTGGAGTAAATGGTTATAACTACCAATCTCTTGCCTTAACTATGAGTCCTAGTGTACCAAATGCTCTTTGTGGTGCAATTGCCCCTGTTCAAGTTGTGGAAGATGATGCTCGTAAAAGGTCAATGTCAAAATCTATTGCTGCCAGAGAACCTGTTCCTCGCAAATCTATTGATACTTTTGGTCAAAGAACATCTCAATATAGAGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGGAAGGAAGGGCAAACAAGGAAAGGAAGGCAAGGTGGTTATGATAAGGAGGAAAAAGCAGCAAGGGCTTATGACTTAGCTGCGCTCAAGTATTGGGGTCCAACCACTCACATAAATTTCCCTTTAAGCACTTATGAGAAGGAACTTGAAGAGATGAAGCACATGACCAGGCAAGAATTTGTGGCCAATCTAAGGAGGAAGAGCAGTGGATTTTCAAGAGGTGCTTCTGTGTATAGGGGTGTGACAAGACACCATCAACATGGAAGGTGGCAAGCTAGGATTGGTAGAGTTGCAGGAAACAAAGACTTGTATCTCGGCACACAAGAGGAAGCTGCAGAAGCATATGATATTGCAGCAATCAAGTTCAGGGGAACTAGTGCTGTGACCAACTTTGATATAAGCAGGTATGACGTGAAGAGAATATGCTCAAGCTCGACCCTAATCGCAGGAGATCTCGCGAAGAAGTCCCCAAAAGAGTTATCTCCTGGCGTCGGTGTTGCCATAGCCACCACGACCGATGACTTCAATTCCAATGCAACCCATCAGCAACAGGTGCAACCGTTTTTGGCTGTAACAAATGGTGAGCACTCTTCTGATGAGTTGGCCAACATGGTTTGGAATAATGATGATAGGAATTCCAATGAGAAACAGGTGAATGATTATAGTACTTCTGAGAACAGCAAGAATGATAAAATTAAGAATGCTTCAAACTCAGAAGGAAGTAGTTCCAAATGTTGTGTGGGAATGGGAAATGAGTTTGGGGTCAATGGTGCTTCAGAGTTTGGACATGGGTTGTTCTCATTGCAGGGTCCAAAGTATAATAATGATGATGATGATAATGATGAAGAAGATGATGGGAACAATAACGACAACAAGGGTAATGATAACTTGAATAATGACAACAATCGCATTGGGAACAGCATGGGACTGGTTCATCAAGTTCCTATGTTTGCTTTGTGGAATGAATGA 1809 0.4268 MGDWMGFSLTPHLRIDEVYGNGRENQEENHGGCPSSHPPRLSVMPLRSDGSLCVSDPFGHSSGAPQEWRYDNGVVAGGGSSNNEEGPKLEDFLGCYSNSSDIAETKVYCQDQDQNQNSISSRINVNVAPSCFSNNTEIEANNHGENFTNPPPASLIQSFHAYNNNDDGNQRGVIPNNNNGMYKSWLASQSQSSGVNGYNYQSLALTMSPSVPNALCGAIAPVQVVEDDARKRSMSKSIAAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKKSPKELSPGVGVAIATTTDDFNSNATHQQQVQPFLAVTNGEHSSDELANMVWNNDDRNSNEKQVNDYSTSENSKNDKIKNASNSEGSSSKCCVGMGNEFGVNGASEFGHGLFSLQGPKYNNDDDDNDEEDDGNNNDNKGNDNLNNDNNRIGNSMGLVHQVPMFALWNE 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0386 602 Gene3D AP2/ERF domain 357 414 IPR036955 GO:0003700|GO:0006355
Mibi04g0386 602 Gene3D AP2/ERF domain 257 323 IPR036955 GO:0003700|GO:0006355
Mibi04g0386 602 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 82 501 - -
Mibi04g0386 602 CDD AP2 356 414 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 Pfam AP2 domain 258 313 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 Pfam AP2 domain 356 404 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 CDD AP2 257 323 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 FunFam AP2-like ethylene-responsive transcription factor ANT 257 323 - -
Mibi04g0386 602 ProSiteProfiles AP2/ERF domain profile. 357 412 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 SUPERFAMILY DNA-binding domain 257 323 IPR016177 GO:0003677
Mibi04g0386 602 ProSiteProfiles AP2/ERF domain profile. 258 321 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 MobiDBLite consensus disorder prediction 547 587 - -
Mibi04g0386 602 MobiDBLite consensus disorder prediction 23 45 - -
Mibi04g0386 602 PRINTS Ethylene responsive element binding protein signature 394 414 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 PRINTS Ethylene responsive element binding protein signature 259 270 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 SUPERFAMILY DNA-binding domain 356 414 IPR016177 GO:0003677
Mibi04g0386 602 MobiDBLite consensus disorder prediction 571 587 - -
Mibi04g0386 602 SMART rav1_2 357 418 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 SMART rav1_2 258 327 IPR001471 GO:0003700|GO:0006355
Mibi04g0386 602 MobiDBLite consensus disorder prediction 486 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0386 Mibi-ChrMibi04 6640688 6644295 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0386 1 437 AP2-EREBP Transcription Factor Family AT1G72570 49.370 8.00e-125 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Mibi04g0386 AP2 1.2e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0386 04 6640688 6644295 Mibi04g0386 04 6640688 6644295 ECH