Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0384 ATGATAAGTGATACAAGTGTAAGAAATAGATCCCCTTTCACAGCAATTCAATGGCAAGAACTTGAACAACAAGCTCTTATCTTCAAGTACCTGGTCTCAGGAAGCCCAATACCACCTGATCTCATTTTCTCTGTCAAAAGAAGCCTAGACTCTTCAGCCTCTTCTTCTTCCTCTTCAAGGCTCTTCCCCTTCCATCCAATTGGATGGGGATGCCTAGAAATGGGGTACGGCAGAAAAATAGACCCAGAGCCAGGAAGGTGCAGAAGAACAGATGGCAAGAAATGGAGATGCTCAAAAGAAGCCTATCCAGACTCAAAATACTGTGAGAGGCACATGCACAGAGGCAAAAACCGTTCAAGAAAGCCTGTGGAAATTTCTTCAACAACAGCAACAACTGGCATTCCATCAAACACATCATCGCAGTCAATGATCTCTTCACCATACAGTAACAGAAGCCTCACCATGAGCAATCCCAATCCACCACCCTCAGCTACTTCTCCTTTCCCTTTCTCTCTATTTCCCTCTGATTCCCAACCTTATTCCCATGTTTACCAAAATTCTTCTCTTAATCCCTTGTTCTACACCCATTCAACCCCATGTAGACCTCTTGATTCTGATTTCCCTTCTCCAAAGGACAACACCCACCAGCTATTTTCAGACTCTGGATCTTATTCTAGGGATGAGGACTATAGGCATATTCATCATGGAATGAGGGAAGGTGTGGATGAGAGAGCTTTCTTCCCTGAAGCCTCAGGGAGTGTTAGGAGCTTTCCTGATTCATATCAACAATTACCAATGAGTTCATGTAAGCCTTATTCAAACTCCCAGTTTCAGAACATGAATGATAATTCAACTCCAAGACAAGAACAACATGGCTTTATCCTGGAAAGAGACTTCAAATCACCTGGAGAAGTAAAACATGAAAATGAAAATGAGATGGCCCAGAGATCCCTTCATCATTTCTTTGGTGAATGGCCTCCAAAGAACACAGATTCCTGGCTTGATCTTGCTTCAAATTCCAGAATCCCCTCTGGTAATGTTTTATCATCTATATAG 1056 0.4261 MISDTSVRNRSPFTAIQWQELEQQALIFKYLVSGSPIPPDLIFSVKRSLDSSASSSSSSRLFPFHPIGWGCLEMGYGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEISSTTATTGIPSNTSSQSMISSPYSNRSLTMSNPNPPPSATSPFPFSLFPSDSQPYSHVYQNSSLNPLFYTHSTPCRPLDSDFPSPKDNTHQLFSDSGSYSRDEDYRHIHHGMREGVDERAFFPEASGSVRSFPDSYQQLPMSSCKPYSNSQFQNMNDNSTPRQEQHGFILERDFKSPGEVKHENENEMAQRSLHHFFGEWPPKNTDSWLDLASNSRIPSGNVLSSI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0384 351 Pfam WRC 82 124 IPR014977 -
Mibi04g0384 351 PANTHER GROWTH-REGULATING FACTOR 5 11 334 IPR031137 GO:0005634|GO:0006351|GO:0032502
Mibi04g0384 351 SMART QLQ_2 11 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi04g0384 351 ProSiteProfiles WRC domain profile. 81 125 IPR014977 -
Mibi04g0384 351 MobiDBLite consensus disorder prediction 122 159 - -
Mibi04g0384 351 MobiDBLite consensus disorder prediction 112 170 - -
Mibi04g0384 351 Pfam QLQ 12 45 IPR014978 GO:0005524|GO:0005634|GO:0006355
Mibi04g0384 351 ProSiteProfiles QLQ domain profile. 12 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0384 Mibi-ChrMibi04 6620963 6622192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0384 10 124 GRF Transcription Factor Family AT3G13960 69.565 2.36e-56 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Mibi04g0384 WRC 7.2e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi04g0384 04 6620963 6622192 Mibi04g0384 04 6620963 6622192 ECH