Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0382 ATGCCCTTCAAAACCTTCCTATTTGGCTGTTTCAGATCCAAGAATAATAAAAACCAATCCTATGATCCATCTTTAGTCCCTAAAAAAGCACCCTCTAGGAGACTCTCCCTCTCTGATTTGAGCAATGTTTCTTCAATCTCTATCATTAGTGACTTATCCAACTCTATTCTAGGTTCAAATCTTCATGTTTTCACCTTCAAGGAACTTCAAGAGATCACTAACAACTTCAGTAGAAGCAGTGTTCTCGGTGAAGGCGGGTTCGGAAAAGTGTATAAAGGCTTCATTGATGATAAGCTTAGGCCTGGATTGAAGCCTCAAGTTGTGGCAGTCAAAGTTTTAGACTTAGATGGGAAACAAGGCCATAGGGAATGGTTGGCTGAAGTTATATTTCTGGGGCAGTTGAAGCATCCCAATCTGGTGAACCTAATAGGGTATTGCTGTAAAGATGAGAACAGGCTATTGGTATATGAATATATGGAGAGGGGAAATTTAGAGGATAAGCTTTTTAAAGGCTATTTAGCAGCTTTGCCATGGTTAACAAGAATCAAGATAGCAATTGGGGCAGCAAAAGGTCTTGCTTTTCTTCATGAAGAAGATCAACCAGTAATATACAGAGATGTTAAAGCCTCAAACATACTGTTAGATGCTGATTACAATGCTAAACTGTCTGATTTTGGACTAGCAATAGACGGTCCATATGAAGATCAGAGCCACATCACAACTCGAGTTATGGGTACCCACGGCTATGCTGCTCCTGAGTATATTATGACAGGACATTTAACAACAATGAGCGATGTATACAGCTATGGGGTGGTTCTCTTGGAGCTACTTACAGGGAAGAGGTCAGTGGACAAGAATAGACCATTTAGAGAGCAAGATTTAGTAGAATGGGCAAGACCATTTCTGAAAGATACCCAAAAACTAGAAAGAATAATGGATCCGAGACTTGAAGGTCAATACTCCGTTGAAGGAGCCAAAAAGGTAGCAAATTTGGCTCATCAATGTCTAAGTCATCAGGCCAAGATTCGACCTTCCATGCGCACAGTGGTCAAGTCATTAGAATCTATCATGAACCTCACAGATATTCCACTTAGCCATTTTGTCTATGTGGTTCCTAGTGAGGGTGACGTGGAAGGTTGGGTACAGAGTAAAATTGAAACAGAGGAGAAAGTGGAGGTGAAGGAGAAGGGACGATTGAAAAATAGGAAGAATCGAAGACGTAAACGACAGATTAAACCATTGAAGTCTCGTGCCGTTTACACTGATACGACATTGTATAAATCTCTTGGTACTAGTTTGTACTTTGTACCATCAAATTAA 1320 0.4038 MPFKTFLFGCFRSKNNKNQSYDPSLVPKKAPSRRLSLSDLSNVSSISIISDLSNSILGSNLHVFTFKELQEITNNFSRSSVLGEGGFGKVYKGFIDDKLRPGLKPQVVAVKVLDLDGKQGHREWLAEVIFLGQLKHPNLVNLIGYCCKDENRLLVYEYMERGNLEDKLFKGYLAALPWLTRIKIAIGAAKGLAFLHEEDQPVIYRDVKASNILLDADYNAKLSDFGLAIDGPYEDQSHITTRVMGTHGYAAPEYIMTGHLTTMSDVYSYGVVLLELLTGKRSVDKNRPFREQDLVEWARPFLKDTQKLERIMDPRLEGQYSVEGAKKVANLAHQCLSHQAKIRPSMRTVVKSLESIMNLTDIPLSHFVYVVPSEGDVEGWVQSKIETEEKVEVKEKGRLKNRKNRRRKRQIKPLKSRAVYTDTTLYKSLGTSLYFVPSN 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0382 439 Pfam Protein tyrosine and serine/threonine kinase 79 353 IPR001245 GO:0004672|GO:0006468
Mibi04g0382 439 Gene3D Phosphorylase Kinase; domain 1 39 158 - -
Mibi04g0382 439 ProSitePatterns Protein kinases ATP-binding region signature. 82 111 IPR017441 GO:0005524
Mibi04g0382 439 PANTHER OS01G0588500 PROTEIN-RELATED 35 356 - -
Mibi04g0382 439 SUPERFAMILY Protein kinase-like (PK-like) 52 354 IPR011009 -
Mibi04g0382 439 ProSiteProfiles Protein kinase domain profile. 76 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0382 439 FunFam Serine/threonine-protein kinase BIK1 43 158 - -
Mibi04g0382 439 SMART serkin_6 76 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi04g0382 439 FunFam Serine/threonine-protein kinase PBS1 159 367 - -
Mibi04g0382 439 CDD STKc_IRAK 82 356 - -
Mibi04g0382 439 Gene3D Transferase(Phosphotransferase) domain 1 159 364 - -
Mibi04g0382 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0382 Mibi-ChrMibi04 6590046 6592238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0382 51 390 Glycoside Hydrolase AT3G07070 47.522 7.49e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mibi04g0382 PK_Tyr_Ser-Thr 1.9e-47 CL0016